Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g3141 ATGAACAGAAAAGGTAGTACTATCTGTTTTGTCTTACTTCACATTTATCTGAACATTGTGCTGACAATTTCAGCACCTGAAAGTACCATTGTAACACAACTTCCAGGTTTCAATGGAACAATACCTTCCAAACACTATGCTGGGTATGTAACTGTGGATGAAAGTCATGGAAGGAATTTGTATTACTATTTTGTTGAGTCGGAAGGTAAACCTTCTGAGGATCCAGTGGTTCTTTGGCTCAATGGTGGACCTGGATGCTCTAGCTTTGATGGCTTCATATATGAGCATGGTCCTTTCAATTTTGAAGCATCAAAGACAAAGGGAAGCCTGCCGACTCTGCACCTTAATCCATACAGCTGGAACAAGGTTTCCAGTATTATATATTTGGACTCTCCTGCTGGTGTTGGGTTTTCGTACTCTAAGAATGAAACCGATTACGTAACCGGTGACATAAAGACTGCGTCTGACTCACATGCCTTTCTCCTTAAGTGGTTCAAACTATATCCCGAATTCCTTTCCAATCCTTTCTTCATTGCCGGAGAGTCATATGCAGGAGTTTATGTGCCTACTCTTGCCTATGAAGTAATGAAAGGAATCGATGCTGGAGTGACGCCGAAACTGAATTTTAAGGGTTACATTGTTGGAAATGGGGTTACAGATGAACAAATTGACGGCAATGCTCTTGTTCCATTTGTACATGGGATGGGTCTTATATCAGATGAATTGTTTGAGGAGGTTAACCGCGAGTGTAACGGGAATTTCTATGACTCACTCAACGATAATTGTACAAACAAGCTTTCAAAAATTGACGAGGACATTGATGGATTGAACGTATATAACATTCTAGAACCATGCTATCATGGCACTGAGGCAGATAAAATTATCACATCGTATATTAGATTGCCGTCTAGTTTCCGGGAGTTAGGTGAGACCGAGAAACGTCATCCTGTGAGGAAGAGAATGTTCGGTCGCGCTTGGCCTCTAAGAGCACCTGTCAGAGATGGAAATGTACCAACTTGGCCACAAATTACTAATAGCAACAATGTTCCATGCACAGATGGCTCTGTTGCAAATGCATGGTTGAACAATGACGCAGTCAGAAAAGCAATTCACACTGTAGAGAAAAGTGTAGTCAGTAGTTGGGATTTATGCACAGACAAAATTTCCTTCAATCATGACGCCGGAAGCATGATAAAGTACCACAAGAACCTAACTTCCAGAGGATATCGAGCTCTTATATTCAGTGGTGATCATGACATGTGTGTTCCATTTACGGGGAGTCAAGCATGGACGAGATCAATTGGATACCAGATTGTTGATGAATGGAGGCCTTGGCTATCCAATGGTCAAGTTGTTGGGTATACTCAAGGATATGACAACAATCTTACTTTTCTGACTATAAAGGGAGCTGGCCATACTGTTCCAGAATATAAACCACAAGAAGCATTGGATTTTTATAAACGTTTTCTCGCTGGATTGAAGATATGA 1488 0.4113 MNRKGSTICFVLLHIYLNIVLTISAPESTIVTQLPGFNGTIPSKHYAGYVTVDESHGRNLYYYFVESEGKPSEDPVVLWLNGGPGCSSFDGFIYEHGPFNFEASKTKGSLPTLHLNPYSWNKVSSIIYLDSPAGVGFSYSKNETDYVTGDIKTASDSHAFLLKWFKLYPEFLSNPFFIAGESYAGVYVPTLAYEVMKGIDAGVTPKLNFKGYIVGNGVTDEQIDGNALVPFVHGMGLISDELFEEVNRECNGNFYDSLNDNCTNKLSKIDEDIDGLNVYNILEPCYHGTEADKIITSYIRLPSSFRELGETEKRHPVRKRMFGRAWPLRAPVRDGNVPTWPQITNSNNVPCTDGSVANAWLNNDAVRKAIHTVEKSVVSSWDLCTDKISFNHDAGSMIKYHKNLTSRGYRALIFSGDHDMCVPFTGSQAWTRSIGYQIVDEWRPWLSNGQVVGYTQGYDNNLTFLTIKGAGHTVPEYKPQEALDFYKRFLAGLKI* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g3141 495 ProSitePatterns Serine carboxypeptidases, serine active site. 178 185 IPR018202 GO:0004185
Tpr5g3141 495 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 19 492 IPR001563 GO:0004185|GO:0006508
Tpr5g3141 495 Pfam Serine carboxypeptidase 35 491 IPR001563 GO:0004185|GO:0006508
Tpr5g3141 495 Gene3D alpha/beta hydrolase 23 320 IPR029058 -
Tpr5g3141 495 SUPERFAMILY alpha/beta-Hydrolases 31 493 IPR029058 -
Tpr5g3141 495 Gene3D - 347 494 - -
Tpr5g3141 495 PRINTS Carboxypeptidase C serine protease (S10) family signature 116 128 IPR001563 GO:0004185|GO:0006508
Tpr5g3141 495 PRINTS Carboxypeptidase C serine protease (S10) family signature 129 139 IPR001563 GO:0004185|GO:0006508
Tpr5g3141 495 PRINTS Carboxypeptidase C serine protease (S10) family signature 164 189 IPR001563 GO:0004185|GO:0006508
Tpr5g3141 495 PRINTS Carboxypeptidase C serine protease (S10) family signature 462 475 IPR001563 GO:0004185|GO:0006508
Tpr5g3141 495 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 20 19 492 - -
Tpr5g3141 495 ProSitePatterns Serine carboxypeptidases, histidine active site. 462 479 IPR033124 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g3141 Tpr-Chr5 54207602 54211856 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g3141 356 492 Calmodulin-binding Proteins AT2G22960 45.985 5.52e-40 140