Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g3130 ATGCCTGAACAAATTCCATATGGTGTTGCTGCAAGCCTCATTAACAGGTTGGCTTCTGCAGCTTTTCGTGAATTTGGACGGATTTATGGTGTTATGGATGAGCTGGAAAGGCTTAAGAGTACAGTTGAATCCATCAAAGCTGTGCTAGTTGATGCCGAGGACAAACAAGAACAAAGTCATGCTGTCCAAATTTGGATAAAAAGACTCAAAGATGATGTACTTCATCCTGCTGATAACTTGCTTGATGAATTTGTTATTCAAGATATGAAACACAAAATGGATGAAACAACTAAGAACAAAGTGACCAAGGTACTTGTTTCTTTATCTCCAAACAAAGTTTCTTTTCGCCGAAAAATGGCTCATGAAATTGAAAAAATACAAAAAAAACTTAATGATGTGGTGAAAGATATGTCTGGGTTGAATCTAAACCAAAATGTTGTGGTGGTTCAGAAAACTAGTAGTGTGAGGAGGGAAACAAGTTCTTTTGTGTTAGAATCAGATATCATTGGAAGAGAAAATGATAAAAACGAGGTAATAAACTTGTTGAGACAACCTCATGGAAACAACAATGTCTCCACGGTTGCTATTGTTGGAATTGGTGGTTTGGGAAAGACGGCTCTTGCTCAATTGGTATATAATGATAGTGAAGTAAAAGAGATTTTCGAAAAGATCATGTGGGTATGTGTCTCTGAAAACTTTGTTGTCAAAACCATTGTGCAGAACATGTTGGAATCATTAACACAAAGCAAAATTGATGGCACATTACCATTGGACAACTTGCAAAATATGGTTCATGACAAATTATTTGGTAAGAGATACTTGTTAGTTCTGGATGACATTTGGAATGAGAATTTTGAAAAATGGGGTCAGTTGAGGAGTTACTTAATGTGTGGTGCTCAAGGCAGTAAGATTTTAGTGACAACTCGTAGTAAAACAGTGGCACAGACAATGAGTGTAAGTGACCCCTATGTTTTGAATGGTTTGAGTCAAGAAGAATCATGGGATTTGTTAAAGAAGATTGCATTTGGGGATGGTACCATTGAGGTGAATCGGTCTTTTGAATCAATTGGTAAGAAGATAGCTAAAAAGTGTAGTGGTGTACCACTAGCAATCAGAACACTAGGAGGCCTATTACAGGGTAATAGGGAGGAAAAGGAATGGATTGATATTTTACAAGGTGCATTTTGGAAGTTATGTGAAGACGAAGAAAGCATCATGCCAGTGTTGAAATTGAGTTACCAAAACCTGTCTCCTCAACTACGACAATGTTTTGCTTATTGCTCTTTATATCCTAAGGATTGGGAAATAGAGAATGATGAGTTGATTCAACTATGGATGGCACAAGGTTATCTTGAATGTTCAGATGAAAATCAGTCCATCGAAGACATCGGTAACCAATTCGTGAAGATTCTCTTGATGAAGTCTTTTTTCCAAGATGCTCAACTTGATAATGATAATTCTGATATAGTTAGTTTCAAAATGCATGATTTAATACATGATCTTGCAATGCAAGTAGGCAGCAACGATTGTTGTTACTTGGACAGTGAAACAAAAAGAGTTGTAGGATGTCCCATGCATATAATGTTGAAAAGTGATGCTTTTGGTTTGTTGGAGTCATTGGATGCAAACAGGATGCAAACTTTAATTTTGTTGACTACAAAGGAGTTGAATGAGAAGGAATTGACTGTCATCTCAAAATTCAAATACTTACGTGTCTTGAAGTTATCAGGTTGTTCTTTAGGTAAGTTGTCTGATTCAATTGGAAAGTTGAAGCATTTAAGATATCTTCAGTTGTTCGAATGCAAAGGACTAGGAAGTCTTTCCAAATCCATCAGCAATCTTGTTTGTTTACAAACACTAATATTAGATGATTTTGAAGAAGTTGAATTTTCGACAAAAGATATCTCAAAACTAATCAATATGAGACATTTTTGTATTGCAAATTTAAAAGCTTCGGAACCAAAGAAGACAACTTCTCGATTTGGAAAATTGAATGTGGGGCGACAATATAATTGTGTCATTTTTTCAAATTGGTTTTCTCCACTCACAAATATTGTTCAAATCTCTCTCGATGGTTGTGATGGTTTGAAGCATCTCCCACCAATGGAACGTCTCCCGTTTCTTAAGTCACTTAGTATACACACACTTAATGAATTGGAATTCATATATTATGAAGAGCCTCTTTTATCTGAATCATTTTTCCCATCTTTGGAGAAATTAAAATTTTTTGGATGTCCAGAACTGAGGGGATGGAGGAGGATGCGGGATGATGTCCATGATGATGATACCTCGGTTACTTCTTCACAGTCATACCATCTCTCCTTTCCTCGTCTTTCTGAATTAACTATTTATGGATGTTGTAAGTTGACTTACATGCCTACTTTTCCAAAACTTGATCAGAGATTGATTTTAACATATTCTAAACTGGAGGTATTGGAAGCGACATTAAACATGGTAGGTTCAAAGTGTTCGATTGAATTCCCTCCTCTTTCCATGCTAAAATACTTGAGTATTGGTGGATATGATTTGAATGTGGAAAAACTCCCAAAGGATTGGGTGCTAAATCTGACTTCTCTCAAGGAACTTGTTTTTTGTAATCTTCCAGATCGAACATTTCAAAAAATTGGAATTTGGTTTAATGACAACCTCAACTATCTTCCTTTCTTGGAAAGTATCACATTTTCATCTGTTAAAGGTCTAAAGGGATTGCCAGATTGGGTTTGCAACCTTTCATCACTTCACCGTATCACATTTTTGGACTGTAAAGTTTTAGCTTCGCTGCCCGAAGGATTGCCCCGCCTTGCCAAATTACAGACCCTAAAAATCGTTGATTGTCCCGATTTAATTGAAGAATACAAAATGCAAACAAGTGAAACATGGCACAAAATTGCTCACATCCCAAACATAATCCTAAAGATATCTTCTTATTAA 2931 0.3617 MPEQIPYGVAASLINRLASAAFREFGRIYGVMDELERLKSTVESIKAVLVDAEDKQEQSHAVQIWIKRLKDDVLHPADNLLDEFVIQDMKHKMDETTKNKVTKVLVSLSPNKVSFRRKMAHEIEKIQKKLNDVVKDMSGLNLNQNVVVVQKTSSVRRETSSFVLESDIIGRENDKNEVINLLRQPHGNNNVSTVAIVGIGGLGKTALAQLVYNDSEVKEIFEKIMWVCVSENFVVKTIVQNMLESLTQSKIDGTLPLDNLQNMVHDKLFGKRYLLVLDDIWNENFEKWGQLRSYLMCGAQGSKILVTTRSKTVAQTMSVSDPYVLNGLSQEESWDLLKKIAFGDGTIEVNRSFESIGKKIAKKCSGVPLAIRTLGGLLQGNREEKEWIDILQGAFWKLCEDEESIMPVLKLSYQNLSPQLRQCFAYCSLYPKDWEIENDELIQLWMAQGYLECSDENQSIEDIGNQFVKILLMKSFFQDAQLDNDNSDIVSFKMHDLIHDLAMQVGSNDCCYLDSETKRVVGCPMHIMLKSDAFGLLESLDANRMQTLILLTTKELNEKELTVISKFKYLRVLKLSGCSLGKLSDSIGKLKHLRYLQLFECKGLGSLSKSISNLVCLQTLILDDFEEVEFSTKDISKLINMRHFCIANLKASEPKKTTSRFGKLNVGRQYNCVIFSNWFSPLTNIVQISLDGCDGLKHLPPMERLPFLKSLSIHTLNELEFIYYEEPLLSESFFPSLEKLKFFGCPELRGWRRMRDDVHDDDTSVTSSQSYHLSFPRLSELTIYGCCKLTYMPTFPKLDQRLILTYSKLEVLEATLNMVGSKCSIEFPPLSMLKYLSIGGYDLNVEKLPKDWVLNLTSLKELVFCNLPDRTFQKIGIWFNDNLNYLPFLESITFSSVKGLKGLPDWVCNLSSLHRITFLDCKVLASLPEGLPRLAKLQTLKIVDCPDLIEEYKMQTSETWHKIAHIPNIILKISSY* 977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g3130 976 Gene3D - 10 128 - -
Tpr5g3130 976 PANTHER OS05G0414200 PROTEIN 35 795 - -
Tpr5g3130 976 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 427 IPR027417 -
Tpr5g3130 976 CDD AAA 169 280 - -
Tpr5g3130 976 Gene3D - 149 322 IPR027417 -
Tpr5g3130 976 SUPERFAMILY L domain-like 493 952 - -
Tpr5g3130 976 Gene3D - 413 504 IPR036388 -
Tpr5g3130 976 Coils Coil 123 143 - -
Tpr5g3130 976 Gene3D - 327 412 IPR042197 -
Tpr5g3130 976 PRINTS Disease resistance protein signature 193 208 - -
Tpr5g3130 976 PRINTS Disease resistance protein signature 267 281 - -
Tpr5g3130 976 PRINTS Disease resistance protein signature 364 378 - -
Tpr5g3130 976 PRINTS Disease resistance protein signature 588 604 - -
Tpr5g3130 976 Coils Coil 35 55 - -
Tpr5g3130 976 PANTHER DISEASE RESISTANCE PROTEIN RP 35 795 IPR044974 GO:0006952
Tpr5g3130 976 Gene3D Ribonuclease Inhibitor 542 799 IPR032675 -
Tpr5g3130 976 Gene3D Ribonuclease Inhibitor 800 962 IPR032675 -
Tpr5g3130 976 Pfam NB-ARC domain 171 415 IPR002182 GO:0043531
Tpr5g3130 976 CDD RX-CC_like 7 133 IPR038005 -
Tpr5g3130 976 Pfam Rx N-terminal domain 11 98 IPR041118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g3130 Tpr-Chr5 54112318 54116120 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g3130 190 505 WRKY Transcription Factor Family AT5G45050 25.449 9.73e-12 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g3130 - - mtr:MTR_8g027540 1174.84