Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g3122 ATGGGTTGTTCTTTCTCTGGTTTAAACGCATTATACGACTCTGTAAACGGTGGTGGTGATGTTTGGATCAACGAGAATCGATTCCGAATCTTGAGACAACTCGGTGAAGGTGGATTCGCTTTTGTTTATCTTGTTAAAGAAGCTCCTAATGACTCTGCTACCGGTGGTCTCGCTAATAAACTCAAAGACTCTTCTCATCTTTCCGATGATGGATCTTATGCTATGAAAAAGGTCCTCATTCAGAACAATGAGCAGCTGGAGTTGGTCAGAGAGGAGATACGCGTCTCGTCACTGTTTAGTCACCCCAATCTCCTCCCACTTCTTGATCATGCAATCATTTCTGTGAAGCCTACCCCAGAAACATCTTGGAGCCATGAAGCATACTTGTTATTTCCAGTTCATTTGGATGGAACATTGTTAGACAATGCCAAAACAATGAAAGCCAAAAAGGAACACTATTCTACCTCAGATGTTCTTCAAATATTTCGGCAGCTTTGTGCAGGACTAAAGCACATGCACAATTTAGATCCTCCATATGCACACAATGATGTCAAACCTGGTAATGTTCTCCTAACACACATAAAAGGACAATCACCACTGGCCATACTGATGGATTTTGGCAGTGCTCGTCCTGCAAGGAGGCATATTAGCTCTAGATCAGAGGCACTCCAGTTGCAGGAATGGGCATCTGAACATTGCTCTGCTCCTTTCCGATCCCCTGAGCTGTGGGATTGCCCAAGCCATGCTGATATAGACGAGAGGACTGACGTTTGGTCACTAGGATGCACATTATATGCAATAATGTATGGGGTATCTCCATTTGAATATGCACTTGGAGAGTCTGGTGGAAGCCTGCAATTGGCTATTGTAAATGCTCAGGTCAAATGGCCAGCTGGACATAAACCTTCATATCCAGATGCTCTTCATCAGTTTGTTTCGTGGATGCTTCAGCCCCAGGCTGCTATGCGGCCCAGGATAGACGATATCATTATCCATGTTGACAAATTGATTGCAAAGTTCTCTCAATGA 1029 0.4393 MGCSFSGLNALYDSVNGGGDVWINENRFRILRQLGEGGFAFVYLVKEAPNDSATGGLANKLKDSSHLSDDGSYAMKKVLIQNNEQLELVREEIRVSSLFSHPNLLPLLDHAIISVKPTPETSWSHEAYLLFPVHLDGTLLDNAKTMKAKKEHYSTSDVLQIFRQLCAGLKHMHNLDPPYAHNDVKPGNVLLTHIKGQSPLAILMDFGSARPARRHISSRSEALQLQEWASEHCSAPFRSPELWDCPSHADIDERTDVWSLGCTLYAIMYGVSPFEYALGESGGSLQLAIVNAQVKWPAGHKPSYPDALHQFVSWMLQPQAAMRPRIDDIIIHVDKLIAKFSQ* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g3122 342 SUPERFAMILY Protein kinase-like (PK-like) 20 332 IPR011009 -
Tpr5g3122 342 SMART serkin_6 28 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g3122 342 Pfam Protein kinase domain 66 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g3122 342 Gene3D Transferase(Phosphotransferase) domain 1 15 341 - -
Tpr5g3122 342 CDD STKc_16 27 338 - -
Tpr5g3122 342 ProSiteProfiles Protein kinase domain profile. 28 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g3122 342 PANTHER - 1 341 - -
Tpr5g3122 342 PANTHER SERINE/THREONINE-PROTEIN KINASE 16 1 341 - -
Tpr5g3122 342 ProSitePatterns Serine/Threonine protein kinases active-site signature. 179 191 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g3122 Tpr-Chr5 54029011 54032731 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g3122 33 332 EF-hand Containing Proteins AT4G04710 26.214 1.14e-13 69.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Tpr5g3122 Pkinase 2e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g3122 K08856 - gmx:100803659 646.351