Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr5g3122 | ATGGGTTGTTCTTTCTCTGGTTTAAACGCATTATACGACTCTGTAAACGGTGGTGGTGATGTTTGGATCAACGAGAATCGATTCCGAATCTTGAGACAACTCGGTGAAGGTGGATTCGCTTTTGTTTATCTTGTTAAAGAAGCTCCTAATGACTCTGCTACCGGTGGTCTCGCTAATAAACTCAAAGACTCTTCTCATCTTTCCGATGATGGATCTTATGCTATGAAAAAGGTCCTCATTCAGAACAATGAGCAGCTGGAGTTGGTCAGAGAGGAGATACGCGTCTCGTCACTGTTTAGTCACCCCAATCTCCTCCCACTTCTTGATCATGCAATCATTTCTGTGAAGCCTACCCCAGAAACATCTTGGAGCCATGAAGCATACTTGTTATTTCCAGTTCATTTGGATGGAACATTGTTAGACAATGCCAAAACAATGAAAGCCAAAAAGGAACACTATTCTACCTCAGATGTTCTTCAAATATTTCGGCAGCTTTGTGCAGGACTAAAGCACATGCACAATTTAGATCCTCCATATGCACACAATGATGTCAAACCTGGTAATGTTCTCCTAACACACATAAAAGGACAATCACCACTGGCCATACTGATGGATTTTGGCAGTGCTCGTCCTGCAAGGAGGCATATTAGCTCTAGATCAGAGGCACTCCAGTTGCAGGAATGGGCATCTGAACATTGCTCTGCTCCTTTCCGATCCCCTGAGCTGTGGGATTGCCCAAGCCATGCTGATATAGACGAGAGGACTGACGTTTGGTCACTAGGATGCACATTATATGCAATAATGTATGGGGTATCTCCATTTGAATATGCACTTGGAGAGTCTGGTGGAAGCCTGCAATTGGCTATTGTAAATGCTCAGGTCAAATGGCCAGCTGGACATAAACCTTCATATCCAGATGCTCTTCATCAGTTTGTTTCGTGGATGCTTCAGCCCCAGGCTGCTATGCGGCCCAGGATAGACGATATCATTATCCATGTTGACAAATTGATTGCAAAGTTCTCTCAATGA | 1029 | 0.4393 | MGCSFSGLNALYDSVNGGGDVWINENRFRILRQLGEGGFAFVYLVKEAPNDSATGGLANKLKDSSHLSDDGSYAMKKVLIQNNEQLELVREEIRVSSLFSHPNLLPLLDHAIISVKPTPETSWSHEAYLLFPVHLDGTLLDNAKTMKAKKEHYSTSDVLQIFRQLCAGLKHMHNLDPPYAHNDVKPGNVLLTHIKGQSPLAILMDFGSARPARRHISSRSEALQLQEWASEHCSAPFRSPELWDCPSHADIDERTDVWSLGCTLYAIMYGVSPFEYALGESGGSLQLAIVNAQVKWPAGHKPSYPDALHQFVSWMLQPQAAMRPRIDDIIIHVDKLIAKFSQ* | 343 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr5g3122 | 342 | SUPERFAMILY | Protein kinase-like (PK-like) | 20 | 332 | IPR011009 | - | |
Tpr5g3122 | 342 | SMART | serkin_6 | 28 | 337 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tpr5g3122 | 342 | Pfam | Protein kinase domain | 66 | 332 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tpr5g3122 | 342 | Gene3D | Transferase(Phosphotransferase) domain 1 | 15 | 341 | - | - | |
Tpr5g3122 | 342 | CDD | STKc_16 | 27 | 338 | - | - | |
Tpr5g3122 | 342 | ProSiteProfiles | Protein kinase domain profile. | 28 | 337 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tpr5g3122 | 342 | PANTHER | - | 1 | 341 | - | - | |
Tpr5g3122 | 342 | PANTHER | SERINE/THREONINE-PROTEIN KINASE 16 | 1 | 341 | - | - | |
Tpr5g3122 | 342 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 179 | 191 | IPR008271 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr5g3122 | Tpr-Chr5 | 54029011 | 54032731 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr5g3122 | 33 | 332 | EF-hand Containing Proteins | AT4G04710 | 26.214 | 1.14e-13 | 69.7 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | NAK | Tpr5g3122 | Pkinase | 2e-28 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr5g3122 | K08856 | - | gmx:100803659 | 646.351 |