Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g3102 ATGATGATAGAAAATTGTTCTTCAAGTGGTAAAGGTTACAATCATGAATCATCAAATCAACAAGAAGATGAAAATGGAACAATGAAATTCTCCAACAAAGCAATAGCAACATCAAGACAATGGACATCATTAAGAAATCCAAGAATTGTGAGAGTGTCACGTTCATTAGGAGGAAAAGACAGACATAGCAAAGTATGCACAATTAGAGGATTAAGAGACCGTCGTATTAGGTTATCTGTACCAACAGCAATTCAATTATATGATCTTCAAGATAGACTTGGTTTAAGTCAACCTAGTAAAGTTGTTGATTGGTTACTTGAAGCAACACAGTCTGATATTGATAAATTACCACCACTTCAAAATATTCCTCAATGTTTTACTACTCAACCACAAACCCTATTGCATCAACAAGGTAATTTTTCTCTTGGAAGTGGTTTTTATGATCATCAAATCAAAGGTAAAGAAGCTGAAATTAGTTATAATACTAATTATTCATCAAATGCTTTTCCATATAACTTGGATTATCCTTCAAGTACTTTATCATTATCTCAATTTGGAAGCAATAATAATCATGGTAATTTATTTGGAAGTAGTAGTGGTATGAAATTTTCGTCCGGTAATTCTTCGCAGTTACTTTTTTGTCCGAATTCTAATTCGGCTATGCCAGCGTCGCTTTTTAGTAGTAGTACTAATTTGCAGCAACATGCTCCGTCGATGGAAATTAGTAGTGATGTTCAAAGACAATTCACCAATGTTCAGATCTTGAATTCATCATCAACAAGTTCTTTCATTCCGTCTCTTCAACTTCCAATCAATTCGCCTTTTAGACGTCTTCCAATGCCGTTTATAAATTCCAAGGTTCTTGATTCAGATCATAATAACACTAGAAATTGA 894 0.3345 MMIENCSSSGKGYNHESSNQQEDENGTMKFSNKAIATSRQWTSLRNPRIVRVSRSLGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDRLGLSQPSKVVDWLLEATQSDIDKLPPLQNIPQCFTTQPQTLLHQQGNFSLGSGFYDHQIKGKEAEISYNTNYSSNAFPYNLDYPSSTLSLSQFGSNNNHGNLFGSSSGMKFSSGNSSQLLFCPNSNSAMPASLFSSSTNLQQHAPSMEISSDVQRQFTNVQILNSSSTSSFIPSLQLPINSPFRRLPMPFINSKVLDSDHNNTRN* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g3102 297 ProSiteProfiles TCP domain profile. 58 116 IPR017887 -
Tpr5g3102 297 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 2 297 IPR005333 GO:0003700
Tpr5g3102 297 Pfam TCP family transcription factor 58 156 IPR017887 -
Tpr5g3102 297 PANTHER TCP FAMILY TRANSCRIPTION FACTOR 2 297 - -
Tpr5g3102 297 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g3102 Tpr-Chr5 53817673 53819373 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g3102 41 126 TCP Transcription Factor Family AT5G60970 83.908 1.64e-46 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Tpr5g3102 TCP 2.5e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g3102 - - mtr:MTR_4g109660 344.739