Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g3066 ATGTCAGACTTGCAGGAAACACATTCTTCTTGCTTCCTATTTTTACTCTCAATTTTCTTCATCCTTCTTTCAGGTAGTTTAGTTGTTGGAGATCCTTTGGACAAAGACAAACAAATTCTGTTGAAGTTGAAAAACTACCTAGACAACAAAACTCTTGCAGACCAAGGAAAGTACATATATTGGAACACTAATTCTTCAAATTCCAATCCATGTCAATGGCAAGGAATCTTGTGTAGCAAAGAAGAAAGAGTAATTGGCATAGATCTCTCTAACAGTGACATCACAGGAGAGGTATTTCAAAGCTTCTCTCAACTCACCGAGCTAACACACCTCGATCTCTCGCAGAATACGCTGTTCGGATATATTCCGGATGACTTGAGGAACTGTCATAAGCTATTGCATCTCAATCTCTCTCATAATATTCTTGATGGAGAATTGAATGTGACTGGATTAACAACCTTGCAGATGCTTGATTTGTCCTTGAATAGATTTCATGGAGAAATTGGTTTGTTGAATTTCCCTTCCATGTGTAGAAATTTGGTTACTTTGAATATCTCAGGTAATAACTTAACTGGTGAGATTGGTGATAGTTTTGATCAATGTTCAAATTTGAAGTATTTGGATTTGAGCACTAACAAGTTGAGTGGAGGTATATGGAATGGATTTGCAAGGCTTACACAGTTTTCTGTTGCTGAGAATCAACTCAATGGAAACATTTCATATGAAGCTTTTCCATTGAATTGTGAGCTTGTGGAATTGGATCTTTCTCAAAATGGATTTGTTGGTGAGGCACCAAAGGAAGTTGCTAACTGCAAGAATCTAACCATGTTGAATCTTTCAAGCAACAATTTTACCGGTGTTATCCCTATTGAAATGGGGTCTATTTCAAGGCTTAAAGGATTGTACTTGGGAGGAAACAACTTTTCAAGAGATATTCCTGAGACTCTTTTGAATTTGACTAATTTGGTTTTCTTGGATTTGAGCAGAAACAAATTTGGTGGTGACATACAAAAGATATTTGGGAGATTTCAACAGGTGAGATTTCTTCTATTGCACTCCAATTCTTACACTGGAGGGTTAAGATCATCTGGAATTTTTACATTGCCGAATATTACGCGGATAGACCTAAGCTTCAACAACTTTTCAGGTCCATTACCTGTTGAAATCTCTCGTATGCAAAGTCTAAAACTTCTAATGTTATCATATAACCAGTTCAATGGATCTATTCCATCAGAATTTGGAAATATGCATAACTTGCAAGCACTTGACCTTTCTTTCAACAAGTTGAGTGGATCAATACCTCCTAGCCTCGGAAACTTGAGTTCACTCTTGTGGTTGATGCTGGCAGACAATTCATTAACCGGATCAATCCCTCCAGAGATAGGGAACTGTACTAGTTTGTTATGGCTAAACCTCGCTAACAATAACCTCTCCGGAAAGTTTCCTCGGGAACTTGCCAAAATTGGAAGGAATGCAATGACAACATTTGAATTAAATAGGCGAGACGATGTAATTGTTGCTGGTTCTGGTGAATGTTTAGCAATGAAGAAATGGATACCTGCAGATTACCCTCCGTTCAGTTTTGTGTACGATATCTTAACAAGAAAAAATTGTAGAGGGCTTTGGAATAAATTGCTTAAAGGGTATGGAATTTTTCCATTTTGCACACCTGGTTCCACCCTTAGGGTATCTATGATATCTGGTTATGTTCAGTTAAGTGGAAACAAGCTAAGTGGTGAAATCCCTTCAGAGATTGGAACAATGGTGAATTTCAGTATGTTGCAGTTGGGATTCAACAGTTTCTCTGGTAAATTCCCACCAGAGTTGGGAAACCTTCCCCTTATGGTCTTGAACATGACTAGAAACAACTTTTCAGGTGAAATTCCTATGGAAATTGGAAACTTGAAATGCTTACAAAATCTTGATTTGTCTTGCAACAATTTTTCTGGGAATTTTCCAACAAGTTTGAACAAAGTGTCTGAGCTTAACAAGTTCAACATCTCCTACAATCCCTTCATATATGGTTCAGTCTCATCAAGTGGCCAATTTGGTACTTTTGATAAAGACTCATATTTAGGTGACCCTCTTTTGATTCTTCCAAAGTTCATTGATAATAGTAGCACCAGAAACAATGAAAACATGACCTCTCCCCACAAACACCATAAAAAGCCTACAAATTTGTCTGTGTTTTTGGTTTTTCTAGCCATAACACTTGTTTTCATTATATGTGGTCTTCTAACAATAATAGTTTGTGCATTAGTTAAAAGTCCATCAGATCAATATCTCTTGAGGGATCATATAAAACATATCAATGATTCAAGTAGCTCAGGAATAGGATCCTCGCAATGTTTATCTGATTCGGTTAAAGTCATTCGTTTAAACAAAATAGCTTTCACCTATGCAGACATTTTGAAAGCAACAAACAATTTCTCAGAGAACAGAATCATAGGAAAAGGTGGATTTGGAACAGTATACATAGGAGTTTTCACAGATGGTAGAGAAGTAGCAGTGAAGAAGCTCCTAAGTGAAGGACTCGAAGGCGAAAAGGAATTCCAAGCTGAAATGGAAGTTCTAAGCGGTCATGGTTTCGGTTGGCCTCATCCGAATCTCGTCACACTCTATGGTTGGTGTCTAAACAATTCAGAAAAGATACTTGTTTATGAGTACATAGAAGGCGGAAGCTTAGAGGATCTAATAACCGATACAACCCGTTTGACATGGAAGAAGAGGCTACAAGTTGCTATCGATGTGGCTCGCGCGCTTGTCTATTTACACCATGAATGCAATCCTTCTATTGTTCATAGAGATGTGAAGGCTAGTAATGTGATGCTAGACAAAGAAGGGAAAGCAAAAGTAACAGATTTTGGATTAGCTAGAATTGTCAATGTCGGCGATAGCCATGTGAGTACAATGGTTGCTGGAACTGTTGGATATGTTGCACCTGAATATGGACAAACAATGAAAGCTACTACAAAAGGTGATGTTTATAGTTATGGTGTGTTGGTTATGGAGTTGGCTACAGGTAGAAAAGCAGTGGATGGAGGTGAAGAGTGTTTACTTGAATGGACAAGGCGTGTCGTGGGAAGAAAACAACAACATCAGCAACATCATGTGTTGAGTCATTTGGGTTCAAGACTTGTTGGTGGAGCAGAAGAAATGGGTGAATTGCTATGTATTGGTTTGAAGTGTACAAATGAGGCACCAAATGCTAGGCCAAATATGAAACAAGTTTTGGCTATGCTTATTTTGATATCCAAATCCAATGTTGGAGATTCAAGTGATCATGGACACATTGTTTAG 3300 0.3794 MSDLQETHSSCFLFLLSIFFILLSGSLVVGDPLDKDKQILLKLKNYLDNKTLADQGKYIYWNTNSSNSNPCQWQGILCSKEERVIGIDLSNSDITGEVFQSFSQLTELTHLDLSQNTLFGYIPDDLRNCHKLLHLNLSHNILDGELNVTGLTTLQMLDLSLNRFHGEIGLLNFPSMCRNLVTLNISGNNLTGEIGDSFDQCSNLKYLDLSTNKLSGGIWNGFARLTQFSVAENQLNGNISYEAFPLNCELVELDLSQNGFVGEAPKEVANCKNLTMLNLSSNNFTGVIPIEMGSISRLKGLYLGGNNFSRDIPETLLNLTNLVFLDLSRNKFGGDIQKIFGRFQQVRFLLLHSNSYTGGLRSSGIFTLPNITRIDLSFNNFSGPLPVEISRMQSLKLLMLSYNQFNGSIPSEFGNMHNLQALDLSFNKLSGSIPPSLGNLSSLLWLMLADNSLTGSIPPEIGNCTSLLWLNLANNNLSGKFPRELAKIGRNAMTTFELNRRDDVIVAGSGECLAMKKWIPADYPPFSFVYDILTRKNCRGLWNKLLKGYGIFPFCTPGSTLRVSMISGYVQLSGNKLSGEIPSEIGTMVNFSMLQLGFNSFSGKFPPELGNLPLMVLNMTRNNFSGEIPMEIGNLKCLQNLDLSCNNFSGNFPTSLNKVSELNKFNISYNPFIYGSVSSSGQFGTFDKDSYLGDPLLILPKFIDNSSTRNNENMTSPHKHHKKPTNLSVFLVFLAITLVFIICGLLTIIVCALVKSPSDQYLLRDHIKHINDSSSSGIGSSQCLSDSVKVIRLNKIAFTYADILKATNNFSENRIIGKGGFGTVYIGVFTDGREVAVKKLLSEGLEGEKEFQAEMEVLSGHGFGWPHPNLVTLYGWCLNNSEKILVYEYIEGGSLEDLITDTTRLTWKKRLQVAIDVARALVYLHHECNPSIVHRDVKASNVMLDKEGKAKVTDFGLARIVNVGDSHVSTMVAGTVGYVAPEYGQTMKATTKGDVYSYGVLVMELATGRKAVDGGEECLLEWTRRVVGRKQQHQQHHVLSHLGSRLVGGAEEMGELLCIGLKCTNEAPNARPNMKQVLAMLILISKSNVGDSSDHGHIV* 1100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g3066 1099 Gene3D Ribonuclease Inhibitor 246 362 IPR032675 -
Tpr5g3066 1099 Pfam Leucine rich repeat N-terminal domain 34 79 IPR013210 -
Tpr5g3066 1099 SMART serkin_6 810 1083 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g3066 1099 Gene3D Phosphorylase Kinase; domain 1 774 889 - -
Tpr5g3066 1099 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 5 1086 - -
Tpr5g3066 1099 Gene3D Ribonuclease Inhibitor 567 715 IPR032675 -
Tpr5g3066 1099 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 5 1086 - -
Tpr5g3066 1099 Pfam Leucine rich repeat 369 429 IPR001611 GO:0005515
Tpr5g3066 1099 Pfam Leucine rich repeat 273 332 IPR001611 GO:0005515
Tpr5g3066 1099 Pfam Leucine rich repeat 88 140 IPR001611 GO:0005515
Tpr5g3066 1099 Pfam Leucine rich repeat 178 226 IPR001611 GO:0005515
Tpr5g3066 1099 Gene3D Transferase(Phosphotransferase) domain 1 890 1095 - -
Tpr5g3066 1099 ProSitePatterns Protein kinases ATP-binding region signature. 816 839 IPR017441 GO:0005524
Tpr5g3066 1099 Gene3D Ribonuclease Inhibitor 363 505 IPR032675 -
Tpr5g3066 1099 Gene3D Ribonuclease Inhibitor 175 245 IPR032675 -
Tpr5g3066 1099 SMART LRR_typ_2 416 439 IPR003591 -
Tpr5g3066 1099 SMART LRR_typ_2 295 319 IPR003591 -
Tpr5g3066 1099 SMART LRR_typ_2 440 464 IPR003591 -
Tpr5g3066 1099 SMART LRR_typ_2 392 415 IPR003591 -
Tpr5g3066 1099 SMART LRR_typ_2 105 129 IPR003591 -
Tpr5g3066 1099 Gene3D Ribonuclease Inhibitor 32 174 IPR032675 -
Tpr5g3066 1099 SUPERFAMILY L domain-like 222 484 - -
Tpr5g3066 1099 SUPERFAMILY L domain-like 570 675 - -
Tpr5g3066 1099 CDD STKc_IRAK 816 1084 - -
Tpr5g3066 1099 ProSiteProfiles Protein kinase domain profile. 810 1083 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g3066 1099 SUPERFAMILY L domain-like 87 290 - -
Tpr5g3066 1099 PRINTS Leucine-rich repeat signature 204 217 - -
Tpr5g3066 1099 PRINTS Leucine-rich repeat signature 416 429 - -
Tpr5g3066 1099 Pfam Protein kinase domain 811 1079 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g3066 1099 ProSitePatterns Serine/Threonine protein kinases active-site signature. 932 944 IPR008271 GO:0004672|GO:0006468
Tpr5g3066 1099 ProSiteProfiles Leucine-rich repeat profile. 418 441 IPR001611 GO:0005515
Tpr5g3066 1099 SUPERFAMILY Protein kinase-like (PK-like) 792 1083 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g3066 Tpr-Chr5 53527810 53531785 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g3066 66 1081 Receptor kinase-like Gene Family AT1G55610 33.216 8.63e-149 473
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-2 Tpr5g3066 Pkinase 1.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g3066 - - gmx:100816573 1569.29