Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g3060 ATGGCGCTGTTCAGAAGATTTTTCTACCGAAAGCCGCCGGATCGGCTTTTGGAGATCTCAGAAAGAGTTTATGTTTTTGATTGTTGCTTCTCCCCGGAAGTCTTGGAAGAAGATGAATACAGAGTTTATATGGGGGGAGTGGTGGCTCAGCTACAGGATCACTTTCCGGATGCTTCTTTCATGGTGTTCAACTTCAGAGAAGGGGAGAGACGCACCCAAGTCTCGGACATACTTTCTCAGTATGACATGACAGTTATGGAGTATCCTCGGCAATATGAAGGTTGTCCTCTTTTGCCTCTAGAGATGATCCATCACTTTCTTCGATCAAGTGAAAGCTGGCTGTCTTTGGAGGGGCAACAGAATGTGCTTTTGATGCACTGCGAAAGAGGAGGTTGGCCTGTGCTGGCATTCATGCTCGCAGGTCTTCTGTTATACCGGAAACAGTACACCGGAGAGCAGAAGACTCTTGAAATGGTCTACAAGCAAGCTCCTAGAGAACTACTCCACCTGTTAACTCCTTTCAACCCACAGCCTTCTCAGTTCAGATATCTTCAGTATATTTCAAGGAGACATTTGGGTTCTGAGTGGCCACCATCGGAAACACCCTTGTATCTGGATTGTCTGATTCTTAGAGACCTTCCATTATTTGATGGTGGAAAAGGTTGCAGGCCTGTTGTGCGTGTTTATGGCCCGGACCCTTCAAAACCTGCCAATAGAAGTTCAAAGCTTCTTTTTTCAACCTCAAACTCCAAAAAGCATGCTCGACACTATCAACAGGCAGAGTGTATGCTCGTGAAGATTGATATCCATTTTCGTGTGCAAGGAGATGTAGTTCTCGAGTGCATAAATTTAAATGAAGATTTTACTGGTGAGGAGACGATGTTTAGAATTATGTTCCATACTGCATTTGTGCGGTCAAATATATTGATGTTGAACCGTGATGAAATTGATATTTTGTGGGATGCAAAGGATCAATATCCCAAGGACTTCAAAGCAGAGGTGCTTTTTTTGGACGCTGATGCTGTTATACCTGATGTGAACACAGTCATGGTGAGTGAAGATGCAAATGAGATAGAAAATGCTTCACCTGAGGAATTCTATGAAGTGGAAGAGATTTTCAGCAATGCAATTGATGCACAGGAAAGTAAGGCAGATGATGATTCTCAAACCTTTCATGACAATGCAGTGGGTGGTGAAAATCATAAAGGGATCTTGAGGGAGGATTCAGATCCTCATGCTTTTCAGGATTGCACGCAAGATTATGGGATTCTCAAACAGGTTGGAAAGATGGATTCCGGTATTAATGCTGTGAAAGATATATCCGTTGATGATGTTAACTACAAGTTCAATAAGAGCATGGATTCAGATCCTCAAGCAGTGAAGGACATTGCCATGGATGATGGAGAAATTAAGTCAACTTCCACTGCCATCACTTATGATATGACGATACCTCTGGAAACAAAGGAAATCCTTGAGGACGCTGATCGGGTATCAGAAATTATGGAGAACAGATTTGATGAAGATAACGAAGCAACGGAAAAGGAATTAGATTACAAGGAAGGGCAGCCTATGCCTGATAGTTCCAAACAAAAATCTGGTAAACTACTTCCATCTACTGCTAAGAAACAATTTCCATCAAACTCAAAGCCAGGAGATACTGTTGGAAAACAAAAGATTAAAGAAACCGCTGCTTTTCAGGCAAAACAAGCTAAACCAACTGCAGTGACTAGGTGGATTCCTTCTAACAAGGGTTCTTACACAAATTCGATGCATGTATATTATCCACCATCAAGGATTAATAGTGCACCAGCTGGACTGTCAAATTTAACCACTTCAAAGGAGAAAATGGAAGATAACAAAGCAAAATCTTCATCTGCTCCTTTTGGCTCTGCAGCAGTTGTTTCTGCTGACATGAAAAATGACCTGAAATGTCGGAAGGTGGCCACTTCAAAATCGTTTGGCCACACAGTATCAGAAATTGATGCAAAATGTCCACCATCACCACCATCAAAAGAGACATCTCTTAATTCAGCTACTCGGGCAGAAGAACAGAGCTCAGAGCAATTGCTACAGCCTCCCCCACGGCCTCCTCCTCCTCCCCCTCCTCCACCACCCCCTCCGCCACCACCCTTAACATCATTTAGTAGACAAGACATTAGGGTGAATTTACAGCCTGAAACTTCTCCGTCACTTCCACCTCCGCCACCACCTCCACCCTCCTGGAAGTTTGTGGCTTCATCAATAGTTGGAGAGACCCGTGGTTCCTTACCACTCTTGCCACCCACTCTTCCCTTTGCTAGCAGTGAAATTACATCAAAATTTTCTGAAGTATCTACAACTGTGACCCTGTCAAGGCCTCCCCCTCCTCCACCACCACCTCCACCTCCACCAATCCCCCCTCCAAGGTACGAAGTATCAACCATTCCTCCTCCACCACCACCACCAACAGTACCTCCTACAAAGCGTGGAATTTCATCAATTCCTCCTCCTCCTCCTCCTCCCCCCTCATTTCCTATGTCTTCATCAAACATTTCTTCATTCTCGCCACCTCCAATTGCATCTCATAAAGCTCCAGCCCCACCGCCACCCCCACCTCCGCCACCTTTTGCTAATTCATATATAGGTTCACCACCTCCACCTCCTTTTAATAATGCTCCACCAGCAACACTTCCTCCTCCACCACCACCACCACCACTTCCTCCTTTTACTAGTGCTCCACCAGTACCACCCCCACCTCCTCCACCCCCTTTCAGTGCATCTCAGTCTACACCCCCTCCTTTTAGTAGAGCTCCCCCACCTCCACCTCCACCTCCTCCAATGTCTAGAGCCCCTCCGCCTCCACCTCCTCCTCCTCCAATGTCTGGAGCCCCTCCACCTCCTCCTCCTCCAATGTCTAGAGCCCCTCCGCCTCCACCTCCTCCTCCGATGTCTAGAGCCCCTCCACCTCCTCCGGTGTTTGGAGCCCCTCCACCTCCACCTCCTCCTCCGATGTCTAGAGCCCCTCCACCTCCTCCAGTGTCTGGAGCCCCTCCACCTCCACCTCCTCCAATGTCTAGAGCCCCTCCACCTCCACCTCCTCCGATGTCTAGAGCCCCTCCACCACCTCCTCCAATGCACGGAGCACCACCACCACCACCACCTCCTGGTGGTGGTGGTCGAGGTCCTCCTCCTCCCCCACCTCCTGGTGGTCGAGGCCCACCTCCTCCCCCTCCTCCTGGTGGTCGAGGCCCACCTCCTCCACCTCTTCCTGGTGGTGGACCTCCACCACCACCCCCCTTAGGTTCCAAAGGTGCCAGTGTTGGACCTGCACGCCCTGGTCCAGTGGCACCAGGTCGTGGTGGATATGCACGCCCTGGTGCAGTGGCACCCCGACGATCCTCCTTAAAGCCTTTGCATTGGAGTAAGGTTACAAGGGCATTGCAAGGAAGTTTATGGGAAGAATTACAAAGACACGGAGAACTGCAAATTGCACCAGAGTTTGATGTTTCAGAGCTAGAAAAACTTTTCTCTGCAAATGTTCCAAAACCTACTGATTCAAGTGGCAAACCTGGAGGGAGGCGCAAGTCTACAGGATCTAAACCTGAAAAAGTTCACTTGGTTGACCTAAGGAGGGCCAATAATACGGAAATCATGCTAACTAAGGTTAAGATGCCACTCCCTGATATGATGGCTGCAGTACTGGCTTTGGATGACTCGGTATTAGATGTTGATCAGGTGGAAAATCTCATTAAGTTTTGTCCCACCAAAGAGGAAATGGAACTTTTGAAGGCATACACTGGCGACAAGGAGATTTTGGGGAAGTGTGAACAGTTTTTTTTGGAGCTGATGAAGGTGCCAAGGGTGGAGTCAAAATTAAGAGTATTCGCTTTCAAAATTCAGTTTCAGTCTCAGGTTACAGAATTTAGGAAGAGTTTAAACACTGTGAACTCTGCCTGTGAAGAGGTCCGAAAATCTTACAAACTAAAGGACATCATGAAGAAAATACTTTTTTTGGGTAATACATTGAACCAGGGAACAGCAAGAGGATCTGCAGTTGGATTTAAGTTGGATAGTCTTTTAAAGCTCACCGACACTCGTGCTTCTAACAATAAGATGACACTGATGCATTATCTTTGCAAGGTGCTAGCTGAAAGGTCGCCCGGACTCCTTGATTTTCACAAAGACCTTGTTAGTCTGGAAGGTGCCACTAAGATACAATTGAAATCATTAGCAGAAGAGATGCAGGCAATCACCAAGGGATTAGAAAAGGTTAAACAGGAGCTTGCTGGATCGGAAAATGATGGACCTGTGTCCGAAGTTTTCTGTAAGACGTTGAAAGGATTCATTATGGTAGCTGAATCAGATGTGGCAGATCTAATAACACTATATTCTACGGTGGGTAAAAATGCAGATGCACTTGCACAGTATTTTGGCGAGGATCCAGCTCGATGCCCATGTGAGCAAGTTACTGCAACTCTATTAAATTTTATAAGGTTGTTCCGGAAAGCACATGAAGAGAATTGCAAACAAGCAGAATTAGAGAAGAAGAAAGCTGAGAAAGAGGCTGAAATGGAGAAGGCTAAGGGCGTTAACTTAACAAAGAAGAGTGCAAAAGATAGTTGA 4602 0.4654 MALFRRFFYRKPPDRLLEISERVYVFDCCFSPEVLEEDEYRVYMGGVVAQLQDHFPDASFMVFNFREGERRTQVSDILSQYDMTVMEYPRQYEGCPLLPLEMIHHFLRSSESWLSLEGQQNVLLMHCERGGWPVLAFMLAGLLLYRKQYTGEQKTLEMVYKQAPRELLHLLTPFNPQPSQFRYLQYISRRHLGSEWPPSETPLYLDCLILRDLPLFDGGKGCRPVVRVYGPDPSKPANRSSKLLFSTSNSKKHARHYQQAECMLVKIDIHFRVQGDVVLECINLNEDFTGEETMFRIMFHTAFVRSNILMLNRDEIDILWDAKDQYPKDFKAEVLFLDADAVIPDVNTVMVSEDANEIENASPEEFYEVEEIFSNAIDAQESKADDDSQTFHDNAVGGENHKGILREDSDPHAFQDCTQDYGILKQVGKMDSGINAVKDISVDDVNYKFNKSMDSDPQAVKDIAMDDGEIKSTSTAITYDMTIPLETKEILEDADRVSEIMENRFDEDNEATEKELDYKEGQPMPDSSKQKSGKLLPSTAKKQFPSNSKPGDTVGKQKIKETAAFQAKQAKPTAVTRWIPSNKGSYTNSMHVYYPPSRINSAPAGLSNLTTSKEKMEDNKAKSSSAPFGSAAVVSADMKNDLKCRKVATSKSFGHTVSEIDAKCPPSPPSKETSLNSATRAEEQSSEQLLQPPPRPPPPPPPPPPPPPPPLTSFSRQDIRVNLQPETSPSLPPPPPPPPSWKFVASSIVGETRGSLPLLPPTLPFASSEITSKFSEVSTTVTLSRPPPPPPPPPPPPIPPPRYEVSTIPPPPPPPTVPPTKRGISSIPPPPPPPPSFPMSSSNISSFSPPPIASHKAPAPPPPPPPPPFANSYIGSPPPPPFNNAPPATLPPPPPPPPLPPFTSAPPVPPPPPPPPFSASQSTPPPFSRAPPPPPPPPPMSRAPPPPPPPPPMSGAPPPPPPPMSRAPPPPPPPPMSRAPPPPPVFGAPPPPPPPPMSRAPPPPPVSGAPPPPPPPMSRAPPPPPPPMSRAPPPPPPMHGAPPPPPPPGGGGRGPPPPPPPGGRGPPPPPPPGGRGPPPPPLPGGGPPPPPPLGSKGASVGPARPGPVAPGRGGYARPGAVAPRRSSLKPLHWSKVTRALQGSLWEELQRHGELQIAPEFDVSELEKLFSANVPKPTDSSGKPGGRRKSTGSKPEKVHLVDLRRANNTEIMLTKVKMPLPDMMAAVLALDDSVLDVDQVENLIKFCPTKEEMELLKAYTGDKEILGKCEQFFLELMKVPRVESKLRVFAFKIQFQSQVTEFRKSLNTVNSACEEVRKSYKLKDIMKKILFLGNTLNQGTARGSAVGFKLDSLLKLTDTRASNNKMTLMHYLCKVLAERSPGLLDFHKDLVSLEGATKIQLKSLAEEMQAITKGLEKVKQELAGSENDGPVSEVFCKTLKGFIMVAESDVADLITLYSTVGKNADALAQYFGEDPARCPCEQVTATLLNFIRLFRKAHEENCKQAELEKKKAEKEAEMEKAKGVNLTKKSAKDS* 1534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g3060 1533 MobiDBLite consensus disorder prediction 1171 1195 - -
Tpr5g3060 1533 SMART it6_source 701 1533 IPR015425 -
Tpr5g3060 1533 MobiDBLite consensus disorder prediction 853 1096 - -
Tpr5g3060 1533 Gene3D Protein tyrosine phosphatase superfamily 14 204 IPR029021 -
Tpr5g3060 1533 MobiDBLite consensus disorder prediction 690 713 - -
Tpr5g3060 1533 MobiDBLite consensus disorder prediction 525 553 - -
Tpr5g3060 1533 MobiDBLite consensus disorder prediction 650 741 - -
Tpr5g3060 1533 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1118 1519 IPR015425 -
Tpr5g3060 1533 MobiDBLite consensus disorder prediction 1510 1533 - -
Tpr5g3060 1533 Coils Coil 1494 1528 - -
Tpr5g3060 1533 MobiDBLite consensus disorder prediction 783 839 - -
Tpr5g3060 1533 MobiDBLite consensus disorder prediction 502 524 - -
Tpr5g3060 1533 MobiDBLite consensus disorder prediction 605 631 - -
Tpr5g3060 1533 CDD PTP_PTEN-like 16 190 - -
Tpr5g3060 1533 MobiDBLite consensus disorder prediction 502 554 - -
Tpr5g3060 1533 Pfam Formin Homology 2 Domain 1124 1493 IPR015425 -
Tpr5g3060 1533 MobiDBLite consensus disorder prediction 669 689 - -
Tpr5g3060 1533 PANTHER FORMIN-J 1 1527 - -
Tpr5g3060 1533 Gene3D - 205 336 - -
Tpr5g3060 1533 MobiDBLite consensus disorder prediction 774 1126 - -
Tpr5g3060 1533 Coils Coil 1400 1427 - -
Tpr5g3060 1533 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Tpr5g3060 1533 Pfam C2 domain of PTEN tumour-suppressor protein 199 336 IPR014020 -
Tpr5g3060 1533 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 13 188 IPR029021 -
Tpr5g3060 1533 Gene3D Formin, FH2 domain 1117 1505 IPR042201 -
Tpr5g3060 1533 SMART PTEN_C2_2 198 338 IPR014020 -
Tpr5g3060 1533 MobiDBLite consensus disorder prediction 727 741 - -
Tpr5g3060 1533 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1194 1521 - -
Tpr5g3060 1533 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 200 336 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g3060 Tpr-Chr5 53468849 53480171 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g3060 1 640 FH2 protein (formin) Gene Family AT5G07740 59.909 0.0 772
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g3060 - - gmx:100815515 1089.33