Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g3058 ATGGAAAAAAAGAATAAAGATGTTAATATGAAATCTTCATATAATTTCTTCGTTCTTTTCATTTTCTTTTTTTTCCCGTCTAGGTCTATTTCCGTCACTGATCATAATTCTTTTACACCTTTGGTTAATTATCTTATTGATTGTGGATCCCCCGTTAAAACTCTGCTAAACGATGGTAGAAACTTCAAATCTGATCGTGAAACTACTTCTCTCCTTTCAACGACCGAAGATATTGTAATTTCAGTAGATTCAATAAACATAACAAATATATTTCCTCCTTCGTCATTGCCTTTATGTCAAACTGCTAGAGTCTTCACAGAAGAATCTATATACACTTTCTACATCTCCAAAATCGGTCGAATTTGGATTCGTCTTTATTTCTTCCCTTTTTCTAACCCTACATACAATCTAACAAATTCTATTTTCTCTGTTCATACTGATCATTTTGTTCTCTTGCATGAATTCTCTCCTACTAATAACAATTCAGTTTTTTTCAAAGAATATCTTGTTAATGTTCTTGATGCTAGATTTTCACTCAAGTTCAAACCAAAGAAAGATTCATTAGCATTCATCAATGCAATTGAAATTGTTTCAGCTCCTGATACACTTATATCAGATTCAGCAACTCAAGTTTTTCCACTTGGAGAATTCAAAGGTTTGATGAAATCAGCTTTGCAAGTATCTTATAGAATAAATGTCGGCGGCCCTACCATAACTCCTGAGGTTGACACATTGTCAAGAACATGGGAGACTGATGGTTCATATAACATTTTTCCACAAGGCTCTATGAGTGTTTCTGTCTCAAATAAAAGCATAAAGTATTCACAAGAAAATGGTGTTAATCTTACACCATTGATTGCTCCAAATTCAGTTTATGCAACATGTGTACAAATGAAAGACACTGAAGTTATGCAACCAAAGTTCAATCTTAGTTGGATGGTGAATGTTGAAGAAAGCTACTCTTATTTGATAAGAATGCATTTTTGTGACATTGTTAGCACAAGTCTTGATCAATTGTATTTCAATGTATACATCAATGGGATTGAAGGTGTGGAAGCTTTGGACCTTTCATCTCAAACCAAAGCTCTATCGACCGCGTTTTACATGGATTTTGTGATTGATTCATCTAATATCACAAATGGTTCTATCTTGATTCAAGTAGGGCCACCTAATCTTCAACTAAGTACAACCAATGCAATTTTGAATGGAATTGAGGTGATGAAAATGAGCAATAGTGCTAATAGTTTGGATGGTTTTTTCTCTGTTGATGGAGAATACATAGGACCAAATGTAACATCCAAGGTAATGAAAATTATTGCTATTGTTGGCTTGGCATTGGCTGTGATAGCATTTTTGTTACTAGCAATAATGTATATTAGGTGGTTAAGGAGACCTCTAGATTGGGAAGAAAGTAGAAGTTTATCTTCATGGATTCTTCCTCTTCATTCGAGACGTAAGAAAAGTTGCAACACAAATTTAAACACATCTGATTCACCTAAGAGTAAGAATGGTGGTGGTCATTTTGTTCATTACTCTCCAAGAGGGCAAGAAAAGTTCTTCCATTTTGCCGAATTACAACGAGCTACAAATAACTTTGATGATAAAAGAGTTATTGGTGAAGGAGGATTTGGTAAAGTGTACCTTGGAATATTGGAAGATGGAACAAATGTTGCTATAAAAAGAGGAAGTGGTGGTTCAGGACAAGGGATGAATGAGTTTATAACAGAACTAAGCATGCTTTCTAAGATGCGACATCGCCATTTAGTTTCACTAATAGGTTACTGTGATGAAAACTCAGAAATGGTTCTTATATATGATTACATGTCTAATGGCCCTTTTCGTTCGCACCTTTATGGCTCTAACTTCTCTCCTTTGTCTTGGCAAAAAAGGCTTGAGATATGCATCGGTGCTGCTCGCGGTTTGCATTATCTCCATACAGGTGCATCTCAAAGTATAATACACCGCGATGTGAAGACAACAAATATACTCTTGGATGAGAATTATGTAGCCAAGGTTTCAGATTTTGGTTTATCAAAAGCTATCCAAGATAAATCTCAAGTGAGCACTGCAGTTAAGGGTAGTTTTGGATATCTTGATCCTGAATATTTCAGAAGCCAACAACTAACTCAAAAATCTGATATATACTCATTTGGTGTAGTCCTATTTGAGGTATTGTGTGCTAGGCCAGTTGTGTGTCCTACATTACCTATGGAACAAGCTAACTTAGCTGATTGGGTGTTGCAACAATATAGAATAGGGAATCTTCACAAGATGATTGATAAAAATATAGTTGATACTATAAATCATGAATCATACAAGATTTTTTCACAAATTGGTGTGAAATGTTTAGCAGATCATGGTGTTGATAGGCCTAGTATGGGTGATGTGTTGTGGCATTTGGAACATGCTTTGCAACTACAAATAGCTTCATCACATGTTGATATTCCACTTATAGATCAAAGTACAAATGAATATGAAAGAAATGATGATCACTTACATGGTGTCACAAGTGATGAGTCTGCAAATTCTAGTTCAATTTTGTTTTCTCAAATGGTCAATTTTCAAGGAAGGTGA 2574 0.3493 MEKKNKDVNMKSSYNFFVLFIFFFFPSRSISVTDHNSFTPLVNYLIDCGSPVKTLLNDGRNFKSDRETTSLLSTTEDIVISVDSINITNIFPPSSLPLCQTARVFTEESIYTFYISKIGRIWIRLYFFPFSNPTYNLTNSIFSVHTDHFVLLHEFSPTNNNSVFFKEYLVNVLDARFSLKFKPKKDSLAFINAIEIVSAPDTLISDSATQVFPLGEFKGLMKSALQVSYRINVGGPTITPEVDTLSRTWETDGSYNIFPQGSMSVSVSNKSIKYSQENGVNLTPLIAPNSVYATCVQMKDTEVMQPKFNLSWMVNVEESYSYLIRMHFCDIVSTSLDQLYFNVYINGIEGVEALDLSSQTKALSTAFYMDFVIDSSNITNGSILIQVGPPNLQLSTTNAILNGIEVMKMSNSANSLDGFFSVDGEYIGPNVTSKVMKIIAIVGLALAVIAFLLLAIMYIRWLRRPLDWEESRSLSSWILPLHSRRKKSCNTNLNTSDSPKSKNGGGHFVHYSPRGQEKFFHFAELQRATNNFDDKRVIGEGGFGKVYLGILEDGTNVAIKRGSGGSGQGMNEFITELSMLSKMRHRHLVSLIGYCDENSEMVLIYDYMSNGPFRSHLYGSNFSPLSWQKRLEICIGAARGLHYLHTGASQSIIHRDVKTTNILLDENYVAKVSDFGLSKAIQDKSQVSTAVKGSFGYLDPEYFRSQQLTQKSDIYSFGVVLFEVLCARPVVCPTLPMEQANLADWVLQQYRIGNLHKMIDKNIVDTINHESYKIFSQIGVKCLADHGVDRPSMGDVLWHLEHALQLQIASSHVDIPLIDQSTNEYERNDDHLHGVTSDESANSSSILFSQMVNFQGR* 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g3058 857 ProSiteProfiles Protein kinase domain profile. 532 805 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g3058 857 ProSitePatterns Serine/Threonine protein kinases active-site signature. 652 664 IPR008271 GO:0004672|GO:0006468
Tpr5g3058 857 Gene3D Phosphorylase Kinase; domain 1 501 607 - -
Tpr5g3058 857 CDD STKc_IRAK 538 801 - -
Tpr5g3058 857 SMART serkin_6 532 800 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g3058 857 SUPERFAMILY Protein kinase-like (PK-like) 508 801 IPR011009 -
Tpr5g3058 857 Pfam Protein tyrosine and serine/threonine kinase 535 756 IPR001245 GO:0004672|GO:0006468
Tpr5g3058 857 ProSitePatterns Protein kinases ATP-binding region signature. 538 560 IPR017441 GO:0005524
Tpr5g3058 857 PANTHER OS07G0166700 PROTEIN 26 846 IPR045272 GO:0004714|GO:0006468
Tpr5g3058 857 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 26 846 - -
Tpr5g3058 857 Gene3D - 41 200 - -
Tpr5g3058 857 Gene3D - 224 411 - -
Tpr5g3058 857 Gene3D Transferase(Phosphotransferase) domain 1 608 819 - -
Tpr5g3058 857 Pfam Malectin-like domain 46 409 IPR024788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g3058 Tpr-Chr5 53454283 53457120 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g3058 32 815 Receptor kinase-like Gene Family AT5G61350 58.354 0.0 920
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Tpr5g3058 Malectin_like 3.2e-33 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g3058 - - mtr:MTR_4g109010 1310.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g3058 5 53454283 53457120 Tpr5g3058 5 53454283 53457120 ECH