Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g3029 ATGGAGGGAGGAGATGATCTCCACCACCATCATCACCACCACCATCAGCATCTTCACCATCAACAGCATCAGCAGCAGCAACAGCGACAAAATTTCCCATTTCAACTTCTTGAAAAAAAAGAAGATAATAATCAAGAAGCAGCATCATGCTCAACTTCATCACCATATCCTTCACTAGCAATCTCACCAATCTCCCCAACAGAACCAAGTACATCAAATTCAAACCGATCCAACCAATTAGCATCGGCTTCAGCAGCAACAACCTCAGACCCTGGAAACAAAAAGCCGCCACCAAAACGAACCTCCACTAAAGACCGTCATACCAAAGTAGAAGGGCGTGGCCGCCGTATAAGAATGCCGGCACTTTGTGCCGCTCGGGTTTTTCAACTTACACGGGAATTAGGCCATAAATCTGACGGTGAAACCATTGAATGGCTCCTACAACAAGCTGAACCAGCTGTTATAGCAGCAACTGGTACTGGAACTATTCCTGCTAACTTCACTTCCCTCAACATCTCTCTCCGTAGCTCAGGCTCATCCATGTCTGTTCCATCTCAGCTTAGATCTTCTTACTTCAACCCCAATTTCTCACTTCAACAACGCAGAACACTTTTTCCTGGAATTGGTTTATCATCTTCAGATAACAGCAACAACAACAACACTTCAATGCTTCTAAATTTTCAATCAAATAACCTAAACCTAACAACAAACATGTTGCAGGCGAAACAAGAGCTTCGAGAAGGAAACGCAAACGCAAACGCGCCATCTTCATCTACAACGTTGGATTTATCAGAAACAAGTGGAGGAGAAGAATCTATGGGAGGTGGAAGAAAGAGAAGAACTGGAAGTGAGCAAGATTTATCATCAATACAACATCAAATGGGAAGTTATCTATTGCAATCAAGTGCAGGTTCGATTCCGGCAAGTCATACTCAAATTCCGGCGAATATATGGATGGTGGCTAATTCTAATAACCAAATAATGAGTGGTGGTGATCCTATTTGGACATTTCCGTCGGTGAATAATAGTGCTGCTGCTTTATATAGAGGAGCAGTTTCAACAAGTGGTTTACATTTTATGAATTTTCCACAACCTATGGCTTTGATGCCAGGTCAGCAATTAGGTAATTCGTCCGGTGGTGGCGGAGGTGGAGGTGGTGGTAATATTAATATGAATATGAACATGAATGAAGGACATTTGAGTATGCTCGCCGGTCTTAGTCCTTATCGTCCGGTTACTGATCACCCTCAATCTCATCAGCAACAACAACAACATCAACCAAGTGGATCACAGTCACATCATCGCGGCGGTAGCCATGATGATAGACATGATAATTAA 1338 0.4297 MEGGDDLHHHHHHHHQHLHHQQHQQQQQRQNFPFQLLEKKEDNNQEAASCSTSSPYPSLAISPISPTEPSTSNSNRSNQLASASAATTSDPGNKKPPPKRTSTKDRHTKVEGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSGSSMSVPSQLRSSYFNPNFSLQQRRTLFPGIGLSSSDNSNNNNTSMLLNFQSNNLNLTTNMLQAKQELREGNANANAPSSSTTLDLSETSGGEESMGGGRKRRTGSEQDLSSIQHQMGSYLLQSSAGSIPASHTQIPANIWMVANSNNQIMSGGDPIWTFPSVNNSAAALYRGAVSTSGLHFMNFPQPMALMPGQQLGNSSGGGGGGGGGNINMNMNMNEGHLSMLAGLSPYRPVTDHPQSHQQQQQHQPSGSQSHHRGGSHDDRHDN* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g3029 445 MobiDBLite consensus disorder prediction 1 115 - -
Tpr5g3029 445 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 19 444 IPR005333 GO:0003700
Tpr5g3029 445 MobiDBLite consensus disorder prediction 412 445 - -
Tpr5g3029 445 Pfam TCP family transcription factor 101 243 IPR017887 -
Tpr5g3029 445 MobiDBLite consensus disorder prediction 413 433 - -
Tpr5g3029 445 MobiDBLite consensus disorder prediction 97 115 - -
Tpr5g3029 445 MobiDBLite consensus disorder prediction 249 289 - -
Tpr5g3029 445 ProSiteProfiles TCP domain profile. 103 157 IPR017887 -
Tpr5g3029 445 MobiDBLite consensus disorder prediction 46 96 - -
Tpr5g3029 445 MobiDBLite consensus disorder prediction 249 267 - -
Tpr5g3029 445 PANTHER TRANSCRIPTION FACTOR TCP14-LIKE 19 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g3029 Tpr-Chr5 53214845 53217132 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g3029 94 373 TCP Transcription Factor Family AT3G47620 47.965 1.97e-65 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Tpr5g3029 TCP 5.8e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g3029 - - cam:101512124 555.444
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g3029 5 53214845 53217132 Tpr5g3029 5 53214845 53217132 ECH
Tpr2g1934 2 23241437 23243229 Tpr5g3029 5 53214845 53217132 PCT