Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g3023 ATGCCTAATGGAAGCTTGGAAGATCATCTATTTCGTAAGGGAACACGCGTACTTCCTTGGGCAACAAGAATCAAAGTTGCCACCGGTGCTGCTCGAGGTCTCACCTTCCTACATGACTCTAATCAACAAATTATCTACCGTGATTTCAAGGCTTCTAATATTTTATTAGACTCGGAATTCAATGCAAAACTCTCAGACTTCGGATTGGCCAAAGCAGGCCCCACCGGTGATCGTTCTCATGTTTCTACTCAAGTTTTGGGCACTCATGGCTATGCTGCTCCTGAATATATTCTTACAGGTCGGCTGACAACAAGGTGTGATGTGTATAGCTTTGGAGTTGTGCTATTAGAACTACTATCAGGGCGCAATGCTGTCGACAAAACAAAATCTGGAGCAGAACATAATTTGGTAGATTGGGCAAGACCGTATTTGGGAGATAGAAGGAAGTTGTTTCGGATAATGGACACAAGATTAGAAGGGCAGTATCCACAAAGGGCAGCTTATACAGCTGCAATTCTTGCATTACAATGTATTAGTGAGGCCAAGTTTAGGCCACAAATGTCTGATGTTTTGACTACTTTGGAACATTTGCCAGTCATCAGACATTCAGCTAGTCCTTCTAGAATATTAGACGAGAAACCAATGTCAAGCCCAATGAGCGATAGAGTCTGA 672 0.4286 MPNGSLEDHLFRKGTRVLPWATRIKVATGAARGLTFLHDSNQQIIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDRSHVSTQVLGTHGYAAPEYILTGRLTTRCDVYSFGVVLLELLSGRNAVDKTKSGAEHNLVDWARPYLGDRRKLFRIMDTRLEGQYPQRAAYTAAILALQCISEAKFRPQMSDVLTTLEHLPVIRHSASPSRILDEKPMSSPMSDRV* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g3023 223 PANTHER OS01G0588500 PROTEIN-RELATED 1 210 - -
Tpr5g3023 223 ProSitePatterns Serine/Threonine protein kinases active-site signature. 44 56 IPR008271 GO:0004672|GO:0006468
Tpr5g3023 223 Pfam Protein kinase domain 1 135 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g3023 223 Gene3D Transferase(Phosphotransferase) domain 1 1 208 - -
Tpr5g3023 223 PANTHER BNAC02G17010D PROTEIN 1 210 - -
Tpr5g3023 223 ProSiteProfiles Protein kinase domain profile. 1 199 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g3023 223 SUPERFAMILY Protein kinase-like (PK-like) 1 197 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g3023 Tpr-Chr5 53174789 53177164 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g3023 1 197 Glycoside Hydrolase AT3G07070 55.224 2.97e-70 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Tpr5g3023 Pkinase 1.8e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g3023 - - pvu:PHAVU_003G191400g 378.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g3023 5 53174789 53177164 Tpr5g3023 5 53174789 53177164 ECH
Tpr2g1919 2 22997509 23001397 Tpr5g3023 5 53174789 53177164 PCT