Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g3019 ATGGTACTAAATCCTTCCAGCTTCTGGACTCAAGCAAACGCGCTTTTCAGAAAGAGCTTAACCTTCCAGAAACGGAACGTGAAGACCAACGTTCGACTAATTCTATTCCCATTGATTCTTTGCGTTTTATTGGCTCTTCTTCAACATTTCATCGATACTCAATTGAATACACCTGACTTCAAATGCGGTTGCGTATGTCCCAATCAGAGAGAAACCTGTGATGATTCAGAGAAGCTTTGTGGGATTCAATATTCCGATGAAACTCAAGCTACTTTCTGTAAAATCCCTAATCCACCTGAATGGCCTCCTCTCTTGCAACTTCAATACGTGTACTGCAAGGAAAACCAGTCTTGTCCTTTTAACATGCTTTTTACAGCGGAAAATCGGTCCTTTGCACAGATTGTGTCTGACAATATGTTCCCAAGTGCACTCACTGTGAATTCCTCTGATATCATGGCTAGTTTGGCATCAAATGTGCTGGGATCTGAATCATCGGCTGGGACCGACAGTTTTCTTGATTCTGGTTTCACTTCGGCTCTTCCAGTTTATTATCTACAAACTCAGTGCCCTCAGAACAACTCTGGATTCTCATTTCCCTACCAGATAGAAGGCATAAATTTCGAGCAAGACATCAGATGTGGTCAGGGTATAAACTTTTGGCGTAACAGTTCTGATGATATCAACAATGAGTTATATCAAATTTATGAAAGAAATAACTCCGAAGGAAGGATCAATGAGATATTTTCAGCTGTTGATTTTCTAAATTCAAATGACGATGTATTTGATGTCACTGTATGGTACATGCCAACCAGCATCTGGGCTGAAAATAAATTGTCGAGAGTTCCTCGTTCTGTAAATCTGATATCAAATGCCTACTTGCAGTTTCTGCATGGACCTGGTACCAAAATGTTATTTGAGTTTGTAAAGGAAATGCCAAAATCTGAGACTGCGTATAGGCTCGAGATAGCTTCTCTCCTGGGCGGTCTGTTCTTTACATGGGTCATCCTTCAACTCTTTCCGGTTGTTCTGACATCACTGGTTTATGAGAAGCAACACAAATTAAGAATCATGATGAAGATGCACGGTCTTGGTGATGGGCCATATTGGATGATTACATATGGTTATTTTCTTGTATTATCAGTGATCTACATGTTGTGCTTTGTGATATTCGGCTCAGTCTTGGGATTAAAATTCTTCACCATGAATGACTACAGGATCCAATTCGTGTTTTATTTCATCTATATAAACTTACAAATATCACTGGCATTTATGTTGTCTTCTGTTTTTTCAAATGTTAAGACTGCTACAGTAAGCGCATATATTGGCGTCTTTGGAACCGGGCTATTAGGCGGATTTCTTTTCGACTATTTTCTTCAAGATTCATCATTTCCAAGAAAATGGATCATTTGTATGGAGTTGTATCCCGGGTTTGCTTTATATCGTGGATTATGGGAGTTTGCACAGTCTGCCATCACAGGCAATGATTCGGGGACTGATGGTATGCGGTGGCCGGATCTGAGCGATAGTACAAATGGAATGAAAGAGGTCTTAATTATCATGTTTGTTGAGTGGACAGTATTTCTTTTTGTTGCTTATTACATCGACCAAGTATTATCGACAGGAAGTGGAAAAAGTCCTCTTTTCTTCTTAAAAAGATTTCAGAAAAAACATCTTTCATCATTCAAGAAGCTAAGTATTCAAAGGCAGGGGTCAAAAGTTTTGGCTCACACGGGGAAACCTGATGTCATCCAAGAGAGGGAGAAGGTGGAGCAGCTTCTACTTGAGCCAACCATTAACCATGCAATTGTTTGCGATGACCTAAAAAAATTCTATCCAGGAAGAGATGGAAATCCAGGGAAATTTGCTGTGAAAGAATTGTTCCTTGCTGTGCCTCGAGGGGAATGCTTCGGTATGCTTGGTCCTAATGGGGCTGGGAAGACTTCTTTTATCAGCATGATGATTGGTCTTACAAAGCCAACATCAGGTGCGGCATATGTTCAAGGCCTGGACATAAGAAGTCATATGGATGCAATATATACTAGCATGGGTGTATGCCCACAGCATGACTTGCTGTGGGAAAGCTTGACAGGTAGAGAGCACCTACTTTTTTATGGAAGACTTAAAAATCTTAAGGGTTCAGCCTTGACTCAAGCAGTAGAAGAATCTTTGAAGAATTTAAACCTTTTCCATGGAGGGGTTGCTGATAAAAAAGCTGGAAAATACAGTGGAGGGATGAAGAGGAGGCTCAGTGTTGCAATTTCATTGATTGGGGACCCCAAAGTTGTTTATATGGATGAGCCAAGTACTGGATTAGACCCTGCTTCAAGGAAATGCCTATGGAATGTTATCAGGCTTGCAAAACGGGATCGTGCAATCATTCTTACCACACATTCTATGGAAGAGGCAGAGGCGCTATGTGATCGATTAGGAATTTTTGTAGATGGTAGTTTGCAATGCATAGGAAATCCAAAGGAGCTGAAAGGCAGATATGGAGGAACCTATGTGTTCACAATGACAACATCTTCAGATCACGAGAAGGATGTGGAGAACATGGTACGACAGCTCACCCCAAATGCCAACAAGATATACCATCTCTCAGGCACCCAGAAATTTGAGCTGCCAAAAGAGGATGTTAAAATAGCGAATGTATTCCAAGCTGTTGAAGTTGCAAAAAGAAACTTCACTGTTTTTGCATGGGGTTTAGCTGATACCACATTAGAAGATGTCTTCATTAAGGTAGCACGCCATGCTCAGGCATTTGAGACCTTGTCGTAG 2775 0.409 MVLNPSSFWTQANALFRKSLTFQKRNVKTNVRLILFPLILCVLLALLQHFIDTQLNTPDFKCGCVCPNQRETCDDSEKLCGIQYSDETQATFCKIPNPPEWPPLLQLQYVYCKENQSCPFNMLFTAENRSFAQIVSDNMFPSALTVNSSDIMASLASNVLGSESSAGTDSFLDSGFTSALPVYYLQTQCPQNNSGFSFPYQIEGINFEQDIRCGQGINFWRNSSDDINNELYQIYERNNSEGRINEIFSAVDFLNSNDDVFDVTVWYMPTSIWAENKLSRVPRSVNLISNAYLQFLHGPGTKMLFEFVKEMPKSETAYRLEIASLLGGLFFTWVILQLFPVVLTSLVYEKQHKLRIMMKMHGLGDGPYWMITYGYFLVLSVIYMLCFVIFGSVLGLKFFTMNDYRIQFVFYFIYINLQISLAFMLSSVFSNVKTATVSAYIGVFGTGLLGGFLFDYFLQDSSFPRKWIICMELYPGFALYRGLWEFAQSAITGNDSGTDGMRWPDLSDSTNGMKEVLIIMFVEWTVFLFVAYYIDQVLSTGSGKSPLFFLKRFQKKHLSSFKKLSIQRQGSKVLAHTGKPDVIQEREKVEQLLLEPTINHAIVCDDLKKFYPGRDGNPGKFAVKELFLAVPRGECFGMLGPNGAGKTSFISMMIGLTKPTSGAAYVQGLDIRSHMDAIYTSMGVCPQHDLLWESLTGREHLLFYGRLKNLKGSALTQAVEESLKNLNLFHGGVADKKAGKYSGGMKRRLSVAISLIGDPKVVYMDEPSTGLDPASRKCLWNVIRLAKRDRAIILTTHSMEEAEALCDRLGIFVDGSLQCIGNPKELKGRYGGTYVFTMTTSSDHEKDVENMVRQLTPNANKIYHLSGTQKFELPKEDVKIANVFQAVEVAKRNFTVFAWGLADTTLEDVFIKVARHAQAFETLS* 925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g3019 924 Pfam ABC transporter 625 768 IPR003439 GO:0005524
Tpr5g3019 924 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 602 839 IPR003439 GO:0005524
Tpr5g3019 924 Pfam ABC-2 family transporter protein 312 532 - -
Tpr5g3019 924 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 5 924 IPR026082 GO:0016021|GO:0055085|GO:0140359
Tpr5g3019 924 SMART AAA_5 632 815 IPR003593 -
Tpr5g3019 924 PANTHER ABC TRANSPORTER A FAMILY PROTEIN 5 924 - -
Tpr5g3019 924 Gene3D - 594 868 IPR027417 -
Tpr5g3019 924 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 601 830 IPR027417 -
Tpr5g3019 924 CDD ABC_subfamily_A 606 827 - -
Tpr5g3019 924 ProSitePatterns ABC transporters family signature. 741 755 IPR017871 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g3019 Tpr-Chr5 53120862 53128662 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g3019 611 850 Calmodulin-binding Proteins AT2G36910 23.413 9.27e-12 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g3019 - - gmx:100805474 1364.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g3019 5 53120862 53128662 Tpr5g3019 5 53120862 53128662 ECH