Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g3018 ATGGTAAATTCTGCCCCTGTCACCTTCAGGACTCAGGCAAATGCTCTTATCAGGAAGAATTTAACTTTCCAGAAACGGAACGTGAAGACCAACATTCGGCTTATTTTGTTCCCGATGATCATTTGCGTCTTGCTGGTTCTTGTTCAAAGTCTAATCGACATTGAATTGGATAAATCAAAGTACAAATGTGGCTGCATCTGTGTCAACAACAAAACAAGATGTGATGATTCAGAGAAGGTTTGTGGGGTTCAATATTCTGATCAGATTCAAGTTGAAACCTGTGCTGTTCCTAATCCACCTGAATGGCCTCCTCTCTTGCAACTTCCTGCCGTGTCATGCAAGACAACTGCCTCTTGTTCTTTTACCATGCTCTTCACAGCCAACAATCACTCCTTTGGACAGAGTGTATCTAAAAATATGTTCCCAAGTGCCTTAACTATGAATTACTCTGATAACATGGCTAGTTTGGCACCAAATGTGCTGGGATCTGAATCAATGACTGAAGTCAACAATTTGCATGAACCTGCTTTCACTTTAGAGCTTCCCATTTATTATTTACAAACTCAGTGTCCTCAAAACAACTCAGGATTCTCATTTCCCTACCAGATAGCAGCCACTACTGAGCATCAAGAAATTAAATGTGCTCAAGGTATACATTCATGGCGTAACAGTTCTTCTGAGATCGACACTGATTTATACAAAGGTTATCATAGAGGTAATTCAGAAGGACGAATCAATGAGATATTTTCAGCTTTTGATTTTCTAAATTCAAATGGGGATGAATTCAATGTTACTGTATGGTACAATTCAACCTACAAGGATAACACTAATTTGGCCCCTACAACATTGTTGCGAATTCCTCGTTCGGTAAATCTGATATCGAATGCGTACTTGCAGTTTCTGCGTGGACCTGGTACGAAAATGATATTTGAGTTTGTAAAGGAAATGCCAAAACCTGAGACCCCATTTAGGATTGAGATAGCTTCTCTCCTTGGCAGTTTGTTCTTTACATGGGTCGTCCTGCAGCTTTTTCCAGTTGTTCTAACATCACTGGTTTATGAGAAGCAACACAAATTAAGAATCATGATGAAGATGCATGGTCTTGGAGATGGGCCATATTGGACTATTTCATATGGTTATTTTCTTGCCTTATCAATGATTTACATGTCGTGTTTTGTGATATTTGGCTCAATCTTAGGATTTAAATTCTTCACCTTGAATGACTACAGCATCCAGTTCGTGTTCTATTTCATCTATATAAACTTACAAATTTCACTGGCATTTCTGTTAGCTTCCTTTTTTTCGAATGTTAAGACTGCTACAGTAACTGCATATATAGGCGTCTTTGGGACCGGGCTATTAGCCTGCTTTCTTTTCCAATTTTTAGTTCAAGATACATCGTTTTCAAGAGGATGGATCATTTGTATGGAGTTGTATCCCGGGTTTGCTTTATATCGTGGGTTATATGAGTTTTCACAGTCTGCCTCCGGTGGCAATAATTGGGAGACTGATGGTATGCAGTGGAAGGATCTGAATGACGGCGTCAATGGCATGAAAGAGGTCTTAATTATCATGTTTGCTGAGTGGATAGTAGTACTTTTTGTTGCTTATTACATTGATCAAGTATCGTCAACAGGAAGTGGAAAAAGTCCTTTATTCTTCTTGAAAGGATTTCAGAAAAAATCTCTACCATCATCGAAGAAGCTCAATATTCAAAGGCAAGGTTCAAAAGTTTTCGCTCAGATGGAGAAACCCGATGTCATTCAAGAGAGGGAGATGGTGGAGCAGCTGCTACATGAACCAACCATTAATCATGCCATTGTCTGTGACAACCTAAAAAAATTCTATCCAGGAAGGGATGGAAATCCAGGGAAATTTGCAGTGAGAGAATTGTTCCTTGCGGTGCCTCGAGGAGAATGCTTCGGTATGCTTGGTCCAAATGGTGCTGGGAAGAGTTCTTTTATCAGTATGATGATCGGTCTCACAAAGCCAACATCTGGTGCGGCATATATCCAAGGCCTAGACATAAGAAATCATATGGATGGAATATATACTAGCATGGGAGTTTGCCCACAACATGACTTGCTGTGGGAAAGCTTGACAGGTAGAGAGCACCTAATTTTTTATGGAAGACTTAAAAATCTTACAGGTTCAATCTTGACTGAAGCAGTAGAAGAATCTTTGAAGAATTTAAACCTTTTCCGCGGAGGGGTTGCGGATAAGCAAGCTGGAAAATACAGTGGAGGGATGAAGAGGAGGCTTAGTGTTGCAATTTCATTGATTGGGGACCCCAAAGTTGTTTATATGGATGAGCCAAGTACTGGATTAGACCCTGCTTCAAGGAGATGCCTTTGGAATGTTATCAAGCTTGCGAAACGGGATCGTGCAATCGTTTTAACCACACATTCAATGGAAGAGGCAGAAGCTTTATGTGATCGATTAGGTATATTCGTAAATGGTGGCTTGCAGTGCGTAGGAAATCCAAAAGAGCTGAAAGCCAGACATGGAGGAACTTATGTGTTCACAATGACAACATCTTCGGATCACGAGAAGGACGTGGAGAACATGGTACAACAGCTCACGCCAAACGGCAACAAAATATACCGTCTCTTTGGTACGCAGAAATTTGAATTGCCAAAAGACGATGTAAAAATAGCGAATGTATTCGAAGCTGTTGAAGTTGCAAAAAGAAACTTTACTGTTTTTGCATGGGGTTTAGCTGATACCACACTGGAAGATGTCTTCATCAAAGTAGTACGTGAGGCTCAGGCATTTGATACCTTTTCATAA 2790 0.4029 MVNSAPVTFRTQANALIRKNLTFQKRNVKTNIRLILFPMIICVLLVLVQSLIDIELDKSKYKCGCICVNNKTRCDDSEKVCGVQYSDQIQVETCAVPNPPEWPPLLQLPAVSCKTTASCSFTMLFTANNHSFGQSVSKNMFPSALTMNYSDNMASLAPNVLGSESMTEVNNLHEPAFTLELPIYYLQTQCPQNNSGFSFPYQIAATTEHQEIKCAQGIHSWRNSSSEIDTDLYKGYHRGNSEGRINEIFSAFDFLNSNGDEFNVTVWYNSTYKDNTNLAPTTLLRIPRSVNLISNAYLQFLRGPGTKMIFEFVKEMPKPETPFRIEIASLLGSLFFTWVVLQLFPVVLTSLVYEKQHKLRIMMKMHGLGDGPYWTISYGYFLALSMIYMSCFVIFGSILGFKFFTLNDYSIQFVFYFIYINLQISLAFLLASFFSNVKTATVTAYIGVFGTGLLACFLFQFLVQDTSFSRGWIICMELYPGFALYRGLYEFSQSASGGNNWETDGMQWKDLNDGVNGMKEVLIIMFAEWIVVLFVAYYIDQVSSTGSGKSPLFFLKGFQKKSLPSSKKLNIQRQGSKVFAQMEKPDVIQEREMVEQLLHEPTINHAIVCDNLKKFYPGRDGNPGKFAVRELFLAVPRGECFGMLGPNGAGKSSFISMMIGLTKPTSGAAYIQGLDIRNHMDGIYTSMGVCPQHDLLWESLTGREHLIFYGRLKNLTGSILTEAVEESLKNLNLFRGGVADKQAGKYSGGMKRRLSVAISLIGDPKVVYMDEPSTGLDPASRRCLWNVIKLAKRDRAIVLTTHSMEEAEALCDRLGIFVNGGLQCVGNPKELKARHGGTYVFTMTTSSDHEKDVENMVQQLTPNGNKIYRLFGTQKFELPKDDVKIANVFEAVEVAKRNFTVFAWGLADTTLEDVFIKVVREAQAFDTFS* 930
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g3018 929 CDD ABC_subfamily_A 611 832 - -
Tpr5g3018 929 Pfam ABC-2 family transporter protein 249 538 - -
Tpr5g3018 929 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 594 844 IPR027417 -
Tpr5g3018 929 SMART AAA_5 637 821 IPR003593 -
Tpr5g3018 929 Gene3D - 595 869 IPR027417 -
Tpr5g3018 929 ProSitePatterns ABC transporters family signature. 746 760 IPR017871 GO:0005524
Tpr5g3018 929 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 8 928 IPR026082 GO:0016021|GO:0055085|GO:0140359
Tpr5g3018 929 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 607 844 IPR003439 GO:0005524
Tpr5g3018 929 PANTHER ABC TRANSPORTER A FAMILY PROTEIN 8 928 - -
Tpr5g3018 929 Pfam ABC transporter 632 773 IPR003439 GO:0005524
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Tpr5g3018 Tpr-Chr5 53113142 53120209 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g3018 599 855 Calmodulin-binding Proteins AT2G36910 21.661 8.71e-11 64.3