Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g3017 ATGGGTAAATCACCTGGAAAATGGATCAAAACTGTACTGTTTGGAAAGAAATCATCCAAATCAAATATACCAAGAGGAAGAGAGAAGCTTGGTAATCAAAAAGAAGGAGTTGTTGCTTCCAAGGTTTCAGAAACTGGTTTAGCTTTAGAGCCAACCACCAATACTATTCCCAGACATGAGGAAGACTTGGAGCTGGAGAATAAAGATGCAGAAAATGTTTCGCCTGGGAATCAAGAAATTGACACAGTAGAACCTGTTAATCAAGATGCACCGATTGATCCAGAGACATTGAGGCTGGAGGAAGCAGCCACGAAAGCTCAGGCTGCTTTTAGGGGTTATTTGGCTCGGAGAGCTTTTAGAGCCCTAAAAGGCATAATAAGGTTACAAGCACTTATTCGCGGACACTTGGTTAGAAGACAAGCTGTTGTTACATTATGCTGTATGTATGGAATTGTCAAACTACAAGCACTTGGTCGTGGGCAAAGTGTTAGAAAGTCTGATGTCGGATTTGAAGTTCACGAGAAGTGCATTCTATTGAAGTTTCAGGATGACAAACCTGGAAAGCCAATTACATTATCTGGAAAAATTATGAAGCTGTCAGCAAATACTTTCATTCTTAAGCTTATTGCTTCATCAACTACAATAATGGCCCTGCGTTTGCAATATGTTCCTGGTGATCCAAATTCAGTCCTAAGTTGGTTGGAGCGTTGGTCAGCATCTTGGTTTTGGAAGCCAATTCCTCAACCCAAGAAAGTTCGGGATACGAAGCCTCAGAAAAAGCAGGGTCATATTTCAACTGGAGATGCTCAAACAAGCAAGTCAAAACGTACCCACAGGAAACTTCCTACTGCAAATCTTGACCTAGCCCCATCACAAGCAAATCCTGAAATTGAAAAACCAAAACGAAATGTAAGGAAATTTCCAAGCCAACCCTCAGATCCTGTGCTGGAAAATCCCCAGATTGAGCTTGAGAAGGTTAAACGTAACTTGAGAAAGGTCCATAACCCAGTTGTTGAGACTGCAATTCTGTCAGAAGTTGAATCTGAGACTCTAAAGCCGAATGTGGAAAAGACAGTTGCCTCAAGTGTTGATGTTTCAGAACATGCGGTCATTAGTTCTAATGGAAAGATTAAGAAGGAAGCAGCACTAACCATTTCCAGTGAGCCAGATAACAGAATTACTCCTGGTGATTTAATTACTAAGGAGGTGTTTGACACTCCAAGCAGTTATCAGGTGAATGTGGAATCAAAGCCCTTGACAGATATTACAAGCAAAGATAAAAACATTTCTGACGATGAAGTGAAAAATGAGCCCATAGATTTAGTAGAGACTGTTGGCAAAAATGAAAATTCTCACTTAACAAATGGAGGTTTGAGTCACAAGGAAGATCAAACGGGCAGCGAAAATCAGAAACCAACCCGAAAAGCCTCAATTGTAGCTAAGCAGGAACGTGCAGAGAATGGTTTACACAATAGTCCGACAATTCCAAGTTATATGGCAGCAACTGAATCTGCAAAGGCAAAATTGAGGGCTCAAGGATCCCCAAAAGTTGGACAAGATGGAAGTGAGAAAACCAACAGTGCTCGGCGACAGTCTCTGCCATCTTCAACTAACAGCAAAATCAGTTCGCATTCACCTAAAATACAGAGACCAACTCAATCAGGTGGTAAGGTGGGCCACAAAAGTGACAAAGCTGTATCATCTTCTAAAGATGGAAATGCGAAGGTAATTCAAGCAGAATGGAAGAGGTGA 1752 0.4132 MGKSPGKWIKTVLFGKKSSKSNIPRGREKLGNQKEGVVASKVSETGLALEPTTNTIPRHEEDLELENKDAENVSPGNQEIDTVEPVNQDAPIDPETLRLEEAATKAQAAFRGYLARRAFRALKGIIRLQALIRGHLVRRQAVVTLCCMYGIVKLQALGRGQSVRKSDVGFEVHEKCILLKFQDDKPGKPITLSGKIMKLSANTFILKLIASSTTIMALRLQYVPGDPNSVLSWLERWSASWFWKPIPQPKKVRDTKPQKKQGHISTGDAQTSKSKRTHRKLPTANLDLAPSQANPEIEKPKRNVRKFPSQPSDPVLENPQIELEKVKRNLRKVHNPVVETAILSEVESETLKPNVEKTVASSVDVSEHAVISSNGKIKKEAALTISSEPDNRITPGDLITKEVFDTPSSYQVNVESKPLTDITSKDKNISDDEVKNEPIDLVETVGKNENSHLTNGGLSHKEDQTGSENQKPTRKASIVAKQERAENGLHNSPTIPSYMAATESAKAKLRAQGSPKVGQDGSEKTNSARRQSLPSSTNSKISSHSPKIQRPTQSGGKVGHKSDKAVSSSKDGNAKVIQAEWKR* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g3017 583 MobiDBLite consensus disorder prediction 518 556 - -
Tpr5g3017 583 MobiDBLite consensus disorder prediction 249 314 - -
Tpr5g3017 583 MobiDBLite consensus disorder prediction 420 442 - -
Tpr5g3017 583 PANTHER PROTEIN IQ-DOMAIN 31 1 570 - -
Tpr5g3017 583 Pfam Protein of unknown function (DUF4005) 482 562 IPR025064 -
Tpr5g3017 583 PANTHER IQ-DOMAIN 5-RELATED 1 570 - -
Tpr5g3017 583 MobiDBLite consensus disorder prediction 417 583 - -
Tpr5g3017 583 ProSiteProfiles IQ motif profile. 99 127 IPR000048 GO:0005515
Tpr5g3017 583 Pfam IQ calmodulin-binding motif 101 120 IPR000048 GO:0005515
Tpr5g3017 583 Pfam IQ calmodulin-binding motif 123 140 IPR000048 GO:0005515
Tpr5g3017 583 ProSiteProfiles IQ motif profile. 123 145 IPR000048 GO:0005515
Tpr5g3017 583 Gene3D - 97 146 - -
Tpr5g3017 583 SMART iq_5 121 142 IPR000048 GO:0005515
Tpr5g3017 583 SMART iq_5 98 120 IPR000048 GO:0005515
Tpr5g3017 583 MobiDBLite consensus disorder prediction 447 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g3017 Tpr-Chr5 53105244 53111407 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g3017 1 583 IQD Protein Family AT1G74690 44.571 1.42e-133 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g3017 - - gmx:100794636 845.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1918 2 22889839 22896870 Tpr5g3017 5 53105244 53111407 ECH
Tpr5g3017 5 53105244 53111407 Tpr5g3017 5 53105244 53111407 ECH
Tpr2g1918 2 22889839 22896870 Tpr5g3017 5 53105244 53111407 PCT