Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g3014 ATGGAGAGCTCGAGATCTGGTGATGGAAATAGTGGACTCAAGGAAGATAAGAGAAGTGAACATAGTATTGGTGATGATCATGAAAGTCATCATCATGATCATAAAAAGGAGACTATTGTTGAGGAACAACCCATTGCTAATGCTGAAAAATCAATGGTGGAGGCAGAACGAATAGAATCCTCTGCCAAAAATGATAAGGTTGTTGATGATCAACTTGAGACAACAAAAGTCCAAATGGGTGAAGTGAGAGAAGAAAATCAACGGTTAAAAATGTGTCTCAACAAAATAATGACTGAATACCGGGCACTAGAAATTCAATTTCAAAATATGGTTAAGCAAGAAACAAAGAAAAACAATGTTGATACAAATGATAATAACCATGATGAAATAATGGCAGAATCTGATCTTGTTTCCCTCAGCCTTGGAAGAGTTCCTAGTAACAATGTTCCAAAAAATGAAGACAAAAATAACAAAGTTTCTAAACTAACATTGAATAATGAAGATGAAGAATTTAAGGAAGAGTTGGCTCTTGGATTGGATTGTAAATTTGAAACATCAAAATCAGGTAGCACTACTGAAGGATTACCAAATGTTCCAAGTCCTGTGAATAGTTCTGAAGTAGTTCCTATAAAGGATGATGAAGTTGTGGAAACTTGGCCACCAAGTAAGGTAGTTAATAATAAGACAACTAGAGATGCTGAAGAGGAAGTTGCTCAACAAACTCCGGCCAAGAAAGCTAGAGTTTGTGTTAGAGCACGATGCGACACACCAACGATGAACGATGGATGCCAATGGAGGAAATATGGACAAAAGATTGCAAAAGGAAATCCTTGCCCGCGAGCTTACTATCGTTGCACGGTTGCACCATCATGTCCTGTTAGAAAACAGGTACAAAGATGTGTTGAAGACATGTCAATTTTAATCACAACCTATGAAGGAACACACAACCACAATCTCCCTCTTTCAGCAACAGCTATGGCATCCACGACATCTGCGGCCGCGTCCATGCTATTATCAGGTTCATCAACCTCTCATTCTGGTTCAATCCCCTCAACACAAACCAACAACAATCTTCATGGCCTAAACTTTTACCTACCAGATGGTTCAAAATCAAACCAACTTTACCTATCCAACCCTGCACTATCATCTCAACATTCACATCCAACAATCACTCTTGACCTCACTTCAAATCCATCAAATTCTTCTTCAACATCACCCTTTGTTAGATTCAATAACCAATTACCAAGATACCCTTCTTCCACAAGTCTTAGCTTTAGTTCCCCTGAATCAAATCCAATGCATTGGAATAGCTTCTTAAGTTATGCTACTACACAAAATCAACAACCATATAATAGAAACAATAATAATCTCAGCACATTAAACTTTGGTAGACAACAAAATACAATGGAAAATATATACCAATCCTACATGCAAAAAAACAACAATAATGTTTTACCAGATAGTACTATATCTGCAGCAACAAAAGCAATCACTGCTGATCCAAATTTTCAATCAGCTTTAGCTGCAGCACTTTCTTCACTTATTGGAAACAATACTAATAATAATCAAGGAATTCAAAATAATCAAAGTGGAGGAGAAAATTTGAGTCAGAAAATGAAATGGGCTGAGATGTTTCCTGTTTCTGCTAGCTCATTGCCTTCAAGTTCTAAAGTTAATGGTTGTGCTTCGAGTTTCTTGAACAAGAAGGCGCCGGCGAATGCACAGACAGGAAGTTTGATGTTACTGTCTCCTTCTTTGCCATTTTCTACAACCAAAAGTGCTTCTACATCTCCTGGTGGTGGTGATAATAGTGATAACACCAATTAA 1827 0.3744 MESSRSGDGNSGLKEDKRSEHSIGDDHESHHHDHKKETIVEEQPIANAEKSMVEAERIESSAKNDKVVDDQLETTKVQMGEVREENQRLKMCLNKIMTEYRALEIQFQNMVKQETKKNNVDTNDNNHDEIMAESDLVSLSLGRVPSNNVPKNEDKNNKVSKLTLNNEDEEFKEELALGLDCKFETSKSGSTTEGLPNVPSPVNSSEVVPIKDDEVVETWPPSKVVNNKTTRDAEEEVAQQTPAKKARVCVRARCDTPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPSCPVRKQVQRCVEDMSILITTYEGTHNHNLPLSATAMASTTSAAASMLLSGSSTSHSGSIPSTQTNNNLHGLNFYLPDGSKSNQLYLSNPALSSQHSHPTITLDLTSNPSNSSSTSPFVRFNNQLPRYPSSTSLSFSSPESNPMHWNSFLSYATTQNQQPYNRNNNNLSTLNFGRQQNTMENIYQSYMQKNNNNVLPDSTISAATKAITADPNFQSALAAALSSLIGNNTNNNQGIQNNQSGGENLSQKMKWAEMFPVSASSLPSSSKVNGCASSFLNKKAPANAQTGSLMLLSPSLPFSTTKSASTSPGGGDNSDNTN* 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g3014 608 MobiDBLite consensus disorder prediction 9 43 - -
Tpr5g3014 608 Coils Coil 45 65 - -
Tpr5g3014 608 Pfam WRKY DNA -binding domain 260 317 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr5g3014 608 SMART WRKY_cls 259 319 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr5g3014 608 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 29 599 IPR044810 GO:0003700
Tpr5g3014 608 ProSiteProfiles WRKY domain profile. 254 320 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr5g3014 608 Gene3D WRKY domain 243 321 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr5g3014 608 PANTHER WRKY TRANSCRIPTION FACTOR 61-RELATED 29 599 - -
Tpr5g3014 608 MobiDBLite consensus disorder prediction 589 608 - -
Tpr5g3014 608 SUPERFAMILY WRKY DNA-binding domain 252 320 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr5g3014 608 MobiDBLite consensus disorder prediction 1 66 - -
Tpr5g3014 608 MobiDBLite consensus disorder prediction 52 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g3014 Tpr-Chr5 53082180 53086789 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g3014 79 518 WRKY Transcription Factor Family AT5G15130 41.226 4.62e-89 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tpr5g3014 WRKY 1.8e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g3014 - - pvu:PHAVU_003G192000g 590.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g3187 6 34418980 34423086 Tpr5g3014 5 53082180 53086789 ECH
Tpr5g3014 5 53082180 53086789 Tpr5g3014 5 53082180 53086789 ECH