Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g3013 ATGTTGAATCATTTCCTTAGAAGAGCTTCAAGGATTTCATATCTTACCAAACACAATGTTCTTCCTGCTTTCAATTTTTCCAGGTCTGTCCATTCAATACCACTTGCCACAGTAGAAGCAGAAGAGATATCTGGTGCAAAGCCTGCTGAAGTTTTGAACTTGGTACAGGGTAAATGGATTGGATCATCAAACTGGAATACAGTTGTGGATCCTTTAAATGGGGAGCCATTTATTAAAGTTGCTGAAGTTGATGAAGCAGGCGTTCAGCCTTTTGTTGATAGCTTGACCAGCTGTCCCAAACATGGTTTGCACAATCCTTTTAAGGCACCAGAGAGATATCTTATGTACGGAGACATCTCTGCTAAGGCAGCTCACATGCTCTCTCTTCCTAAGGTTTCAGATTTCTTTGTAAGGCTAATACAGAGAGTTTCTCCAAAGAGTTATCAGCAGGCTTTTGCAGAAGTTTATGTGACACAAAAGTTTCTAGAGAACTTCTGCGGAGATCAGGTTCGTTTCTTGGCTAGGTCTTTTGCAGTACCTGGAAATCATCTTGGGCAGCAAAGTCATGGCTTCCGTTGGCCATATGGTCCGGTGGCAATTATTACTCCTTTTAATTTTCCCCTAGAGATTCCAGTCCTTCAATTAATGGGTGCACTTTATATGGGCAACAAGCCAGTCCTTAAAGTCGATAGCAAGGTGAGCATTGTTATGGAGCAAATGTTGCGCCTTCTTCATTCCTGTGGCTTACCTGTAGAAGATGTAGACTTCATAAATTGTGATGGAAAGACAATGAACAAGCTACTGCTAGAGGCAAATCCAAGAATGACCCTTTTCACTGGTAGTTCAAGAGTGGCAGAGAAGTTGGCTGTTGATTTGAAGGGCCGCGTTAAATTAGAAGATGCTGGATTTGATTGGAAAATATTGGGCCCTGATGTCCATCAGGAAGATTACACTGCATGGGTATGTGACCAGGATGCATATGCATGCAGCGGTCAGAAGTGTTCAGCACAATCATTGTTATTTATGCACGAGAACTGGTCTAAGACTTCGTTTATATCTAAGTTGAAAGAACTCGCTGAGAGAAGAAAGCTAGCAGACTTGACAATCGGCCCAGTCCTTACTTTTACAACTGATTCATTGCTTGAGCACACCAAAAATTTACTTGAGATACCAGGATCAAAGCTGCTCTTTGGGGGTGAGCCTTTGGAGGACCATTCGATTCCGCAAGTTTATGGTGCTATTAAACCAACTGCAGTTTATGTTCCCCTAGAAGAAATTGTGAAGGATAAGAATTATGACCTTGTGACAAAAGAAATATTTGGACCTTTCCAGGTTATTACTGACTACAAAGGCAGTCAACTACCAATTGTGTTGGAGATTTTGGAAAAAATGCATGCACACTTAACTGCCGCCGTAGTTTCAAATGATCCTTTATTCTTACAAGAAGTGATTGGGAAATCGGTAAATGGCACTACCTACGCAGGTCTAAGAGCAAGAACAACTGGAGCTCCACAAAACCACTGGTTTGGACCAGCCGGTGACCCTAGGGGTGCAGGAATCGGAACACCAGAGGCTATAAAACTTGTATGGTCTTGCCACAGAGAAATAATTTATGATTATGGACCAGTATCAAAGGATTGGGAAATTCCTCCTTCAACATGA 1662 0.42 MLNHFLRRASRISYLTKHNVLPAFNFSRSVHSIPLATVEAEEISGAKPAEVLNLVQGKWIGSSNWNTVVDPLNGEPFIKVAEVDEAGVQPFVDSLTSCPKHGLHNPFKAPERYLMYGDISAKAAHMLSLPKVSDFFVRLIQRVSPKSYQQAFAEVYVTQKFLENFCGDQVRFLARSFAVPGNHLGQQSHGFRWPYGPVAIITPFNFPLEIPVLQLMGALYMGNKPVLKVDSKVSIVMEQMLRLLHSCGLPVEDVDFINCDGKTMNKLLLEANPRMTLFTGSSRVAEKLAVDLKGRVKLEDAGFDWKILGPDVHQEDYTAWVCDQDAYACSGQKCSAQSLLFMHENWSKTSFISKLKELAERRKLADLTIGPVLTFTTDSLLEHTKNLLEIPGSKLLFGGEPLEDHSIPQVYGAIKPTAVYVPLEEIVKDKNYDLVTKEIFGPFQVITDYKGSQLPIVLEILEKMHAHLTAAVVSNDPLFLQEVIGKSVNGTTYAGLRARTTGAPQNHWFGPAGDPRGAGIGTPEAIKLVWSCHREIIYDYGPVSKDWEIPPST* 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g3013 553 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 16 552 IPR044638 GO:0004029
Tpr5g3013 553 PANTHER ALDEHYDE/HISTIDINOL DEHYDROGENASE-RELATED 16 552 - -
Tpr5g3013 553 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 310 496 IPR016163 GO:0016620
Tpr5g3013 553 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 44 304 IPR016162 GO:0016491
Tpr5g3013 553 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 327 338 IPR016160 GO:0016491
Tpr5g3013 553 CDD ALDH_F12_P5CDH 53 541 - -
Tpr5g3013 553 Pfam Aldehyde dehydrogenase family 66 494 IPR015590 GO:0016491
Tpr5g3013 553 SUPERFAMILY ALDH-like 53 520 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g3013 Tpr-Chr5 53056113 53062559 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g3013 1 553 Aldehyde Dehydrogenase Gene Family AT5G62530 80.396 0.0 957
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g3013 K00294 - gmx:100806579 1001.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g3013 5 53056113 53062559 Tpr5g3013 5 53056113 53062559 ECH