Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g3012 ATGACAGAACCTGCCTCTAATGTGGCATCTTGCAGTGGAACCTCCATGGAGAAGTCGTCGTCTCCGCCTTCTGAAATAGCAATTGGAATTGACATTGGTACATCACCATGCTGTGTTTCTGTGTGGAATGGTTCCCATGTGCTGGTTTGGGATATAAATGAGATGATGGAGAGATTATGCATAAATTCCAATGATCATGGCTTTTCTACTGAAGCCGCACTCCCCGATGAGAATGTGGATACAATGTCCAACATGAAATCCTTTTTTAGCATGATTTTCGGTGAAGGTACTAATTTCCCATTTCTGATGCACACCGTGGACATTAAGGTTCGCCCTTTTGTGGCTCCATTTGTGAAAAAACTATGGAAATCCACCACTGCAGTAGAAATCCTTGGAAAATTTATGATGGAACTAAAATCATTGGTTGAAACTCGTCTGAAAGGACCTATAAGCAATGTAGTGTTTACAGTTCCAGTTTCATTCAGTCAATTGCAGATAAACCGGATTCATCGCGCTTGTGCAATGGCGGATCTTAAAGTTACCAAACTGATGCCTCAACCAACAGCAGTGGCTTTGTGGTATGTGTATCACCAAGTGCAGCCTTTGGCTTCTTCTCATCAGGATATGGACAATGAAAGCGAGAAAGTTGCTCTTATTTTCAATATGGATGCAGGTTATTGTGATGTTGCTGTTATTGCGACAGAAAAAAGAAAAATCCGAATAAAAGCCTTGACAGGAAGTACTATTGGTGGAGAAGATTTGCTTGGAAATATGATGTTTTATCACTTTCATGATTCTGAAAATATCTTCACGAGAGATGTTCGCTCAGAAACAGATATTATATCGATGGCTTCTCTTCGATGTGGAATGCAGGACTTGATTACTGATCTTTCGTCTGAAGAAAGTGTTAGGGTTGATCTAAATTCAGTAGATGGCATGGAGATACATAGGTATGTAACGCGGAAAGAGTTTGAGGATGTAAACAAAGAGGTGTTTGAGAAGTGTGAAAGTCTAATCATCAAATGCATGAAAGATGCAAAGATAAAAGCTGAGAATATAAATGATGTGATAATTGTAGGTGGTTGTTGTAATATACCAAAGGTGCAGAATCTTGTTAAAGAAATATGCAAAGTAAGCGAACTTTATACAGGTATCGATCCTTTACATGCTGTACTATCTGGTGCAGCATTTGCAGGAGCTCCTAAACATCCATCTGATAGCTTGGACTTGTTTACTTCTCAATTCACACTTTTTACCGTCAGAGTTCAATCTGGCAGCCATGGATTTGTACCTATTATTCCGAGGAACACATCGGTGCCAACATGGAGGGACATAGTTTTCAGAACTATTCAAGATAATCAAACTCAGGCATTGATTCTTGTCTACGAAGGTGACGATATTTTGGGACATATCGTAGCGCATGGAATACCTGAAGCACCAAGAGGAGTTCCTAAAGTCAAAATTTCAATCGCCATAGACCATACAAACAGGTTTACAGTTAATGGTTCTGTTGAGATGCCAGGATCTGAACCATCTGCAATTTCTGTTCATGGAATATGGATGGCAGAGACTAATGATGGACATGTTGGTTGGTGCGACGAGTTACTGATTAGAACATATGGTCATACATTTGGATACCCTCTTCAGTAA 1650 0.3988 MTEPASNVASCSGTSMEKSSSPPSEIAIGIDIGTSPCCVSVWNGSHVLVWDINEMMERLCINSNDHGFSTEAALPDENVDTMSNMKSFFSMIFGEGTNFPFLMHTVDIKVRPFVAPFVKKLWKSTTAVEILGKFMMELKSLVETRLKGPISNVVFTVPVSFSQLQINRIHRACAMADLKVTKLMPQPTAVALWYVYHQVQPLASSHQDMDNESEKVALIFNMDAGYCDVAVIATEKRKIRIKALTGSTIGGEDLLGNMMFYHFHDSENIFTRDVRSETDIISMASLRCGMQDLITDLSSEESVRVDLNSVDGMEIHRYVTRKEFEDVNKEVFEKCESLIIKCMKDAKIKAENINDVIIVGGCCNIPKVQNLVKEICKVSELYTGIDPLHAVLSGAAFAGAPKHPSDSLDLFTSQFTLFTVRVQSGSHGFVPIIPRNTSVPTWRDIVFRTIQDNQTQALILVYEGDDILGHIVAHGIPEAPRGVPKVKISIAIDHTNRFTVNGSVEMPGSEPSAISVHGIWMAETNDGHVGWCDELLIRTYGHTFGYPLQ* 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g3012 549 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 426 510 IPR029047 -
Tpr5g3012 549 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 406 517 IPR029047 -
Tpr5g3012 549 PRINTS 70kDa heat shock protein signature 26 39 - -
Tpr5g3012 549 PRINTS 70kDa heat shock protein signature 153 173 - -
Tpr5g3012 549 PRINTS 70kDa heat shock protein signature 353 369 - -
Tpr5g3012 549 PRINTS 70kDa heat shock protein signature 385 405 - -
Tpr5g3012 549 PRINTS 70kDa heat shock protein signature 483 499 - -
Tpr5g3012 549 Gene3D Actin; Chain A, domain 4 251 334 - -
Tpr5g3012 549 PANTHER HEAT SHOCK PROTEIN 70KDA 17 543 IPR013126 GO:0005524|GO:0140662
Tpr5g3012 549 CDD HSP70_NBD 28 400 - -
Tpr5g3012 549 Gene3D - 28 399 - -
Tpr5g3012 549 PANTHER HEAT SHOCK 70 KDA PROTEIN 8 17 543 - -
Tpr5g3012 549 SUPERFAMILY Actin-like ATPase domain 214 400 IPR043129 -
Tpr5g3012 549 Gene3D - 83 133 - -
Tpr5g3012 549 SUPERFAMILY Actin-like ATPase domain 26 196 IPR043129 -
Tpr5g3012 549 MobiDBLite consensus disorder prediction 1 22 - -
Tpr5g3012 549 Gene3D - 210 382 - -
Tpr5g3012 549 Pfam Hsp70 protein 27 505 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g3012 Tpr-Chr5 53051655 53054071 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g3012 27 510 Calmodulin-binding Proteins AT3G09440 30.593 1.99e-56 198