Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr5g2988 | ATGGGGAATTGCAACACGTGTATAAACTCAGACGCAACTGAGTCAACCGGAAAAGCAACAACCGAGTCGAACCGAGTCGGAAGAAAAGCAAGAAAAACAAAACCAAATCCATACACAGAACAATCGTTAACTTCAGGAGCAGCGATTAAAGTTCTAAAAGAATCAAATCAAAGAAATCGAATTGGAGACAAATATGTTTTAGGTCGTGAGCTAGGTCGTGGTGAATTCGGCATAACATATCTTTGTACAGACAAAGAAACGAAAGAGGAACTAGCTTGTAAGTCAATTTCAAAGAGGAAATTAAGAACAGCTGTTGATGTTGAAGATGTTCGGCGTGAAGCGGCGATTATGGCGACGTTGCCGGAACATCCTAATGTGGTGAAGTTGAAAGCTACTTATGAAGATGATGAAAATGTTCATCTTGTTATGGAGTTGTGTGAAGGAGGAGAATTGTTTGATAGGATTGTTGCGAGAGGGCATTATAGTGAACGTGCTGCAGCTCATGTTGCTAGGACTATTGCTGAAGTTGTTAGGATGTGTCATGTTAATGGTGTTATGCATAGAGATCTTAAACCTGAGAATTTTCTTTTTGCTAATAAGAAAGAAAATTCTGTTCTTAAAGCTATTGATTTTGGTCTCTCGGTTTTCTTCAAGCCCGGGGAGAGATTTTCGGAGATTGTGGGGAGTCCTTACTATATGGCACCGGAGGTTTTGAAGAGGAATTATGGTCCAGAGGTTGATATATGGAGTGCTGGGGTGATTTTGTATATTTTGTTATGTGGGGTGCCTCCGTTTTGGGCTGAGACGGAACAAGGTGTTGCTTTGGCAATTTTGAGGGGAGTAATTGACTTCAAGAGGGAGCCTTGGCCTCAGATTTCTGACAGTGCTAAGAGTCTTGTGCGTCAGATGTTGGAACCTGATCCTAAAAAACGCTTGACGGCAGAACAGGTGCTTGAACATCCTTGGCTACAAAATGCAAAGAAAGCTTCAAACGTACCATTAGGAGATATTGTGAGGACAAGGCTTAAGCAATTCTCCTTGATGAATAGATTCAAAAAGAGAGCTCTCCGGGTAATTGCACAACATTTATCTCTTGAAGAAGTAGAAATAATCAAAGACATGTTTACGTTGATGGATACTGACAAAGATGGCAGAATAACATATGAGGAACTGAAGGCTGGTTTGCGGAAAGTTGGTTCACAACTGGCTGAGCCAGAGATAAAGTTGTTGATGGACGTGGCTGATGTTGATGGGAATGGAGTGCTTGACTATGGAGAGTTTGTAGCTGTTACAATTCACTTGCAAAGAATGGAGAATGACGAGCATTTCCGCAAAGCATTCAAGTTTTTTGACATAGATGAGAGTGAGTATATTGAGTTAAGTGAACTAGAAGCAGCATTAGCAGATGACTTAGGAGAAACTGACTCTAATGTACTGAATGAAATCATGCGAGAAGTTGATACTGACAAGGATGGTCGCATCAGTTATGATGAGTTTGTGGCCATGATGAAAACGGGAACTGATTGGAGAAAAGCATCCAGGCAATATTCTAGAGAAAGATTCAAGAGCCTGAGCATAAACTTGATGAAGGACGGCTCGCTGCAGCTTCATGACGGGATAAGTGGTCAAGCTGTTGTGGTTTGA | 1644 | 0.4136 | MGNCNTCINSDATESTGKATTESNRVGRKARKTKPNPYTEQSLTSGAAIKVLKESNQRNRIGDKYVLGRELGRGEFGITYLCTDKETKEELACKSISKRKLRTAVDVEDVRREAAIMATLPEHPNVVKLKATYEDDENVHLVMELCEGGELFDRIVARGHYSERAAAHVARTIAEVVRMCHVNGVMHRDLKPENFLFANKKENSVLKAIDFGLSVFFKPGERFSEIVGSPYYMAPEVLKRNYGPEVDIWSAGVILYILLCGVPPFWAETEQGVALAILRGVIDFKREPWPQISDSAKSLVRQMLEPDPKKRLTAEQVLEHPWLQNAKKASNVPLGDIVRTRLKQFSLMNRFKKRALRVIAQHLSLEEVEIIKDMFTLMDTDKDGRITYEELKAGLRKVGSQLAEPEIKLLMDVADVDGNGVLDYGEFVAVTIHLQRMENDEHFRKAFKFFDIDESEYIELSELEAALADDLGETDSNVLNEIMREVDTDKDGRISYDEFVAMMKTGTDWRKASRQYSRERFKSLSINLMKDGSLQLHDGISGQAVVV* | 548 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr5g2988 | 547 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 438 | 473 | IPR002048 | GO:0005509 | |
Tpr5g2988 | 547 | ProSiteProfiles | Protein kinase domain profile. | 65 | 323 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tpr5g2988 | 547 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 185 | 197 | IPR008271 | GO:0004672|GO:0006468 | |
Tpr5g2988 | 547 | Gene3D | Transferase(Phosphotransferase) domain 1 | 151 | 332 | - | - | |
Tpr5g2988 | 547 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 474 | 509 | IPR002048 | GO:0005509 | |
Tpr5g2988 | 547 | ProSitePatterns | EF-hand calcium-binding domain. | 415 | 427 | IPR018247 | - | |
Tpr5g2988 | 547 | CDD | STKc_CAMK | 64 | 322 | - | - | |
Tpr5g2988 | 547 | Pfam | EF-hand domain pair | 371 | 430 | IPR002048 | GO:0005509 | |
Tpr5g2988 | 547 | Pfam | EF-hand domain pair | 441 | 504 | IPR002048 | GO:0005509 | |
Tpr5g2988 | 547 | ProSitePatterns | Protein kinases ATP-binding region signature. | 71 | 94 | IPR017441 | GO:0005524 | |
Tpr5g2988 | 547 | SUPERFAMILY | Protein kinase-like (PK-like) | 61 | 331 | IPR011009 | - | |
Tpr5g2988 | 547 | ProSitePatterns | EF-hand calcium-binding domain. | 379 | 391 | IPR018247 | - | |
Tpr5g2988 | 547 | Gene3D | Phosphorylase Kinase; domain 1 | 66 | 150 | - | - | |
Tpr5g2988 | 547 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 402 | 437 | IPR002048 | GO:0005509 | |
Tpr5g2988 | 547 | SUPERFAMILY | EF-hand | 347 | 516 | IPR011992 | - | |
Tpr5g2988 | 547 | ProSitePatterns | EF-hand calcium-binding domain. | 487 | 499 | IPR018247 | - | |
Tpr5g2988 | 547 | Gene3D | - | 333 | 507 | - | - | |
Tpr5g2988 | 547 | PANTHER | BNAA09G44420D PROTEIN | 24 | 523 | - | - | |
Tpr5g2988 | 547 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 366 | 401 | IPR002048 | GO:0005509 | |
Tpr5g2988 | 547 | SMART | efh_1 | 406 | 434 | IPR002048 | GO:0005509 | |
Tpr5g2988 | 547 | SMART | efh_1 | 478 | 506 | IPR002048 | GO:0005509 | |
Tpr5g2988 | 547 | SMART | efh_1 | 370 | 398 | IPR002048 | GO:0005509 | |
Tpr5g2988 | 547 | SMART | efh_1 | 442 | 470 | IPR002048 | GO:0005509 | |
Tpr5g2988 | 547 | SMART | serkin_6 | 65 | 323 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tpr5g2988 | 547 | MobiDBLite | consensus disorder prediction | 12 | 41 | - | - | |
Tpr5g2988 | 547 | Pfam | Protein kinase domain | 65 | 323 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tpr5g2988 | 547 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 24 | 523 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr5g2988 | Tpr-Chr5 | 52890897 | 52895506 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr5g2988 | 1 | 547 | EF-hand Containing Proteins | AT1G74740 | 77.737 | 0.0 | 894 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CAMK_CDPK | Tpr5g2988 | Pkinase | 1.4e-75 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr5g2988 | K13412 | - | gmx:100800559 | 924.85 |