Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2987 ATGGGACACAAAAAGCGAAACTCTGTTCCACGTTCCAAACTATCGCCGGCGGCTTCTCCGGTGGCTCAACCCCCCATCGGCGGAGCCGCCAATGGTTCTACTTCACCCGACGCCGATTCAATTATTCTCTTCGATCAAAATCTCACTAACCCTAGCAAGATCGAATTAGTTTCTCCTCAATCTGAGGGTTCCGATTTCTCTGCAATTAAGGTAGAATGTGAGCGAGCCCTAACCACGTTTCGTCGTGGGAATCATAATAGAGCAATGAAGCTTATGAAGGAGTTGTGCTTGAAGGAGGATGGTTCACCTTACTCCGCTTTCGTTTATCGAATTCATGGGTTTATATGTTTCAAAGTGGCTTCCATTATTACTGATTGTAGTGCTAAACAGCGGCATTTGAAGCATGCTGTTGAATCGGCGCGGAGAGCTGTTGAGCTTTCGCCGAATTCGATTGAGTATGCACATTTTCATGCCACTGTGATGTTGGAAGCAGCCACTGAGGGGAAGGATTATGAGGATGTGGTGCACGAGTGTGAGAGAGGGCTTGCTATTGAGAACCCGAATGATCCTGCTAAGGAGACATTGCAGGATGAGAGCGAACAGAAAGTGTCTAGTTTGGAAGATCGGATATTACATGTCCAGGCTGAGTTGAGGCAGCTGATTCAGAAGTCAAACATAGCTTCATTGTCGTCTTGGATGAAAAATCTGAGTAATGGGGAAGAGAGGTTTCGGTTGATTCCTATAAGGAGGGCTACGGAGGACCCTATGGAGGTTAGGTTGGTTCAGACTAGAAGGCCAAATGAGATTAAGAAGGTGACCAAGACTCCCGAGGAAAGAAGAAAAGAGATTGAAGTAAGGGTAGCTGCTGCAAGGCTGTTGCAGCAGCAGTCGGAGTCACCCCAGTCCCCAAATGAAGGAGATAGGGATGACAGAGCATTGGATGTGTCTTCAGGGTCTAATCAGAGAATAGGTGAGAGGCGAAGGCATGTGAGAAACAATGGCTCTTCAGCCGAAAGGAGAAAGTGGGTGCTAACTTATTGGGATTCACTGAGTATGGATGTGAAGAAGGACTGGCTTAGGATTAAAATATCTGATATCATGTCCCACTTTGGCTCTACAAAGGATACTTTACCGAAAGATGTTTTATCAGAAGCTCTGTTTTATGCTGAAGCCAATAAGACATGGAAATTTTGGAATTGTGGCATTTGTGCTGAGAAATTTCCCAATCAGGAATTTCATAGGCAGCATGTTATGCATGTGCACCTTCAGACTCTGTCGCCAAAAATGCAGAGACTTTTGCCTCAACATGTCGACAATGAATGGATTGAGATGATTCTTAATTGTTCTTGGAAGCCTTTGGATGTCTCAGCTGCAGTTAAAATGATTGACTATAAAGCAAAACTGAAAGGTCCATCTCTTCCAGAGGATTATCTTACTCAGGACTACGATGATTGTTTTAAAGATGATTCAAGCAGCTCTTACCACGAAAAGGAAAGTTTAGGGTACAGTATTGGCAATTGTACGACCGAAAGCAGTAAGTACTATAAAAATGCTGAAAGTGATGCCAAAGAAGGCATTGAGGACCAACAGTTTATGGCAAATCCCGTTACTGATTGTTGGCCAGTATCTGATGACAAGGAGCGTGCAAAACTTCTAGAGAAAATCCATGGAGTATTTGAGATACTTATCAGACACAAATGTCTTGCTGCTAGTCATCTTCACAAAGTCATACAATTTAGTATGGGTGAGATCCAGGGTCTTGCTGCTGGTTCTGAACTTCTAAAACATGATGTAGACCAAACACCAATGTGTATATGCTTTCTGGGAGCTTCACAACTTAAGAAAATTCTCCAGTTTCTGCAGGAAATGTCTCATGCTTGTGGGTTGGGTAGATATTCTGATAAAAGTAGTAGTCCCAAGAATGATTTGAATGATATTAGTCAAGGTCCTGAAATTAAAGATAAAATTGTTCTCAATGGAGATGCATCATGCCTTCTCTTGGATGAGTGTCTACTGCCAACACAAGTCACTCCTGGTACACCCCAGGAGGCTGTCTTCGAGGACATGGTCACCCCTAGTTCTCCTGATGGAATTTCAGACAATAGTGGTGCTTGGCTGTCCTGGCTATATTCAAGTCGGCCTATTGGGGATCAGTTGACGTCATGGATTCGGACCAAAGAAGATAAAACATGTCAAGGACAAGAAATGGTCCGGACACTTGACAAGGAGTTTTATCAATTACATAGCCTGTGCCAGAAGAAGTGTGACCGTATAAGTTATGAGGAAGCACTACAGACAATAGAGGATCTTTGTCTTGAAGAAGGTAAGAAGAGGGAAAATGTGGGAGAATTTGTGCAGCGAAGCTATGAGTCTGTCTTAAAAAGGCGGAGAGAAGAGCTTGCTGAGAGTGAGAATGAAATGATGTATGCTGGCAATAGGTTTGAGATGGATTGTATATCAAATGTTTTGCAAGAAGCAGAAGCGATGAATGTTAATCAATTTGGCTATGAGGAAACATATACCGGTGTGACTTCTCAGTTATGTGACTTGGAATCCGGTGAAGATGATGAATGGAGAATGAAGGACTGCTTGCACCAAATGGATGGCTGTATAGAAATTGCTATTCAGAAACTGAAAGAGCACTCGTCTATAGAGATTAGCAAAGTCGATGCTGAAATAATTAAATGTGTTTCAGAGGTGCAGCAATTGGAACTCAAGCTTGGGCACATTTCTGCCAATGATTATCGAGCAATAATAGTGCCTCTAGTGAAGTCGTACCTAAAGACACTTTTGGAAGATTTGGCTGAGAAAGATGCAAGGGAGAAATCTGATGCTGCAGGTGAAGCATTTTTGGCTGAACTTGCTCTTGATTCCAAGAAGATTAGCAAAGGGGGAAATGAGAACACAAGACATGTGGAGAAGACAAAGGATAAGAAGAAGAATAAAGATCACAGGAAAACAAGAGATTTGAAGGGCACAAGTGGTTCTATGTATCCCTTGCTCCAGTCTACAACTCTTGATTCTGATCTGGTATCACCTGATAGTGACTTTCAAGATCATGAGGTTGTTTCTATGAATGAGGATGATTTGGAACACCACGAAGAGGAATTTAGACGTAAAATTGAGCTTGAAGAGGAGGAAAAAAAGCTTGAAGAAACTTTGGAACTTCAACGGAGGATTGAAAATGAGGCCAAACAGAAGCACCTTGCTGAGCAACAGAAGAAATTATCTGGTACTTGTGTAGAGGAAGTGACAGATAAACGTCAAGATTGTCAATTGAAGCCTGTTGCTGATGGTTCAGATGCACAAGAACATAGAAGACTACCTATGCAGGAACAGCTGGCAAAGGAGAATGGGTGCCCAAATAATCTGGATGTTGTGCTTAATACCACATCAAATGGTTCCATGATGCCGACTAAATCTTCAGCTGATTCAGATTCCCCAAAAATTAATCATTCGCATCAGTCAAAAGTTAAACAAGATATACCCAATGGAATTGTTCCAGAGAATGGTCTACCTTTGCCTGATCGACGTGCAGGAAAAAAACATAAGCGGAATAAGAATTCGTCTAAAATGGTTGATGGAAAGTTGGAATATGTTTCATTGGAGAATGAGAATATTGAGGATGCACACAATGACTATCACTTGAGAGAGCAGTCTAAATTTCATAACAATCAAGAGGCTAAACACTTGTTGGAAAACAATGGAGCAAAGGTGATGAAAGAATCACCAGTGGAAGATGAGGAGGAGGAAAGATTCCAAGCTGATCTTAAAATGGCTGTACGCCAAAGCCTAGACACGTATCAAGCACGTGGAAATTTGCCGTTGGCTTCAAGTATGAGAATACCACAGAGATCTTCCTCCCAAGTAGACCATTTAGGTATTGCATCTTTGGAAGACTCAACTCCGGATGTAAATGGAGCTAGTTTACTTGGTACGGGACTGAGGAATGAAGTGGGTGAATATAATTGTTTTCTCAATGTTATTATTCAGTCATTATGGCATTTAAGACGCTTTCGGGTGGAATTTCTTGCCAGATCAAGATCAGAGCATGATCATGTGGGTAATCCCTGTGTTGTCTGTGCCTTGTATGAAATATTTACTGCTCTAGACCTTGCTTCAAAGGATTCAAGGAGAGAAGCAGTTGCACCTACTTCCCTGCGGATAGCTCTAAGCAACCTATATCCACATAGTAACTTCTTCCAGGAGGCTCAGATGAATGATGCTTCTGAGGTACTGGCAGTGATATTTGACTGCCTTCATCAATCATTTACTCGCGGTTCAGGTGTTTCTGATGCAAAAACAGTGGAAAGCAAGGTCATGGGGTCTTGGGATTGTGCAGCTGGTAGTTGTATAGCACATTCACTTTTTGGAATGGACATTTTTGAACAAATGAATTGCTACCATTGTGGTCTTGAGTCCAGACATTTGAAGTATACTTCCTTCTTTCACAATATAAATGCCAATGCCCTCAGGACAATGAAGGCTACGTTTCCCGAAAGCTCCCTTGACAAGCTTTTGAATCTTGTGGAGAGGAACCATCAATTGGCTTGTGATCAAGAAGTTGGTGGCTGTGGCAAGCTCAACCACATCCATCACTTTCTTTCAACCCCACCCCATGTTTTTATGACAGTTCTAGGTTGGCAAAATACATGCGAGAGTGCTGATGATATAACTGCAACTCTGGCAGCCCTGAGCACCAAGATAAATATCAGTGTTCTTTATCGCGGTTTAGATCCTAAAAGTACCCATAACTTGGTTTCGGTGGTTTGCTACTATGGCCAGCATTATCATTGCTTTGCTTATAGTCATGATCACGGCCAATGGATTATGTATGATGACAAGACTGTTAAGATAATTGGTGGATGGGCTGATGTGCTGACTATGTGTGAGAGAGGGCATCTACAGCCTCAGGTTCTCTTCTTTGAAGCTGTAAACTAG 4941 0.4232 MGHKKRNSVPRSKLSPAASPVAQPPIGGAANGSTSPDADSIILFDQNLTNPSKIELVSPQSEGSDFSAIKVECERALTTFRRGNHNRAMKLMKELCLKEDGSPYSAFVYRIHGFICFKVASIITDCSAKQRHLKHAVESARRAVELSPNSIEYAHFHATVMLEAATEGKDYEDVVHECERGLAIENPNDPAKETLQDESEQKVSSLEDRILHVQAELRQLIQKSNIASLSSWMKNLSNGEERFRLIPIRRATEDPMEVRLVQTRRPNEIKKVTKTPEERRKEIEVRVAAARLLQQQSESPQSPNEGDRDDRALDVSSGSNQRIGERRRHVRNNGSSAERRKWVLTYWDSLSMDVKKDWLRIKISDIMSHFGSTKDTLPKDVLSEALFYAEANKTWKFWNCGICAEKFPNQEFHRQHVMHVHLQTLSPKMQRLLPQHVDNEWIEMILNCSWKPLDVSAAVKMIDYKAKLKGPSLPEDYLTQDYDDCFKDDSSSSYHEKESLGYSIGNCTTESSKYYKNAESDAKEGIEDQQFMANPVTDCWPVSDDKERAKLLEKIHGVFEILIRHKCLAASHLHKVIQFSMGEIQGLAAGSELLKHDVDQTPMCICFLGASQLKKILQFLQEMSHACGLGRYSDKSSSPKNDLNDISQGPEIKDKIVLNGDASCLLLDECLLPTQVTPGTPQEAVFEDMVTPSSPDGISDNSGAWLSWLYSSRPIGDQLTSWIRTKEDKTCQGQEMVRTLDKEFYQLHSLCQKKCDRISYEEALQTIEDLCLEEGKKRENVGEFVQRSYESVLKRRREELAESENEMMYAGNRFEMDCISNVLQEAEAMNVNQFGYEETYTGVTSQLCDLESGEDDEWRMKDCLHQMDGCIEIAIQKLKEHSSIEISKVDAEIIKCVSEVQQLELKLGHISANDYRAIIVPLVKSYLKTLLEDLAEKDAREKSDAAGEAFLAELALDSKKISKGGNENTRHVEKTKDKKKNKDHRKTRDLKGTSGSMYPLLQSTTLDSDLVSPDSDFQDHEVVSMNEDDLEHHEEEFRRKIELEEEEKKLEETLELQRRIENEAKQKHLAEQQKKLSGTCVEEVTDKRQDCQLKPVADGSDAQEHRRLPMQEQLAKENGCPNNLDVVLNTTSNGSMMPTKSSADSDSPKINHSHQSKVKQDIPNGIVPENGLPLPDRRAGKKHKRNKNSSKMVDGKLEYVSLENENIEDAHNDYHLREQSKFHNNQEAKHLLENNGAKVMKESPVEDEEEERFQADLKMAVRQSLDTYQARGNLPLASSMRIPQRSSSQVDHLGIASLEDSTPDVNGASLLGTGLRNEVGEYNCFLNVIIQSLWHLRRFRVEFLARSRSEHDHVGNPCVVCALYEIFTALDLASKDSRREAVAPTSLRIALSNLYPHSNFFQEAQMNDASEVLAVIFDCLHQSFTRGSGVSDAKTVESKVMGSWDCAAGSCIAHSLFGMDIFEQMNCYHCGLESRHLKYTSFFHNINANALRTMKATFPESSLDKLLNLVERNHQLACDQEVGGCGKLNHIHHFLSTPPHVFMTVLGWQNTCESADDITATLAALSTKINISVLYRGLDPKSTHNLVSVVCYYGQHYHCFAYSHDHGQWIMYDDKTVKIIGGWADVLTMCERGHLQPQVLFFEAVN* 1647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2987 1646 Pfam Protein of unknown function (DUF627) 75 186 IPR006866 -
Tpr5g2987 1646 Pfam Protein of unknown function (DUF629) 345 872 IPR006865 -
Tpr5g2987 1646 ProSitePatterns Zinc finger C2H2 type domain signature. 400 421 IPR013087 -
Tpr5g2987 1646 CDD Peptidase_C19 1404 1643 - -
Tpr5g2987 1646 MobiDBLite consensus disorder prediction 1 38 - -
Tpr5g2987 1646 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 1313 1645 IPR028889 -
Tpr5g2987 1646 MobiDBLite consensus disorder prediction 292 334 - -
Tpr5g2987 1646 MobiDBLite consensus disorder prediction 962 1000 - -
Tpr5g2987 1646 PANTHER UBIQUITIN SPECIFIC PROTEINASE 1 1646 - -
Tpr5g2987 1646 Gene3D Tetratricopeptide repeat domain 66 209 IPR011990 GO:0005515
Tpr5g2987 1646 SUPERFAMILY Cysteine proteinases 1313 1643 IPR038765 -
Tpr5g2987 1646 PANTHER INACTIVE UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 53-LIKE 1 1646 - -
Tpr5g2987 1646 Coils Coil 1027 1073 - -
Tpr5g2987 1646 MobiDBLite consensus disorder prediction 303 334 - -
Tpr5g2987 1646 Pfam Ubiquitin carboxyl-terminal hydrolase 1314 1621 IPR001394 GO:0004843|GO:0016579
Tpr5g2987 1646 Coils Coil 786 806 - -
Tpr5g2987 1646 MobiDBLite consensus disorder prediction 1123 1149 - -
Tpr5g2987 1646 Gene3D Cysteine proteinases 1301 1644 - -
Tpr5g2987 1646 Coils Coil 196 223 - -
Tpr5g2987 1646 MobiDBLite consensus disorder prediction 1113 1189 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2987 65 1643 C2H2 Transcription Factor Family AT3G47890 53.721 0.0 1633
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2987 - - gmx:100799759 2418.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2987 5 52869800 52879661 Tpr5g2987 5 52869800 52879661 ECH