Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2977 ATGGCTTATAGACGTTGCCTCTTGCAAAGAGGAAACAACCTCATAGATCGAAGATGTCACCCTTCTTTCACCTACATTCTCCACTCCGACGAAGACAAACGCAACCGTTCAGATGAGAACAAATCATCGTCTTCACAAGGAATCAGTAACAACACTTTTATCAAATCAATCTCCTTTCGAAGCTCTCTTAATGGATCAACGGCTTTTTCTCCGTTCGCTGGATATAATTTTTGCAGAAATATGTCCACACTGAATCGTGATGATTCAGATAATATTAGCGTAATGAGTGATGTAGCTGATGTTCTCACTGATACTGCAATGGATGCTGGTATTCTCACTGAGACTGTTGTGGATGCTGCTGTATCTTCTCAGGCTCCGGTTGTTAGCGAAGTTGTCATTGCTGCTGCTGATAATTATGCACCTGTACAAGTCTTGCAGTATGCCATTGATGCTGTTCATTCTTTTACTGGGTTAAATTGGTGGGCGGCCATAGTTCTAACAACTGTCTTGATTCGAACCGCAACTGTTCCACTCTTAATAAATCAACTCAAGGCCACTTCTAAGCTTACGCTTATGAGGCCTCATTTGGAAGCGATAAAGGAAGAAATGGACGGGAAGACATTTGATCCCGAGGCTGTTGCTGAAGGTCAGAAGCGGATGAAAAGGCTATTCAAAGAATATGGTGTGAGTCCTTTCACGCCATTGAAGGGACTCTTTATTCAAGGTCCTGTCTTCATTAGTTTTTTTCTTGCGATATCAAACATGGCTGAAAAAATGCCCTCATTCAAGCATGGTGGAGCTTTCTGGTTTACTGATCTCTCAACTCCAGATGCCTTATACATTTTTCCAGTTTTGACTGCATTGTCATTCTTAATAGTAGTAGAGTGTAATGTGCAAGAAGGAATGGAAGGAAATCCTATGGGTGATACCATGAAAAAATTCTCGAGGATTCTTGCTTTTGTTTCAGTTCCTCTCACCATGGGTTTTCCAAAGGCAATATTTTGTTACTGGATTACATCAAATTTGTTTTCTCTGGCATATGGAACAGTGCTTAAAGTTCCTGGCATGAAGAAAACTTTGGGTATTCCTGAAATACCTGCAGCACCCACCAGTTCTCCACAATCTCCCTTCTCTATTTTTCCAGCGCTAAAACAACCTGCATCAGCTGCAGATAGTCAAAGTTCATCGCCAGTTGAATCGCCAATTGAATCACCAAAACGACCAAATAAAAAGACATCTTCTTCTGCTATTATTAGTCAAAGGCTAAGAACCTTAGAGAAACAAGTAAAAGGAAGAAAGAAAAACAAGAAAATTGACTAG 1320 0.4061 MAYRRCLLQRGNNLIDRRCHPSFTYILHSDEDKRNRSDENKSSSSQGISNNTFIKSISFRSSLNGSTAFSPFAGYNFCRNMSTLNRDDSDNISVMSDVADVLTDTAMDAGILTETVVDAAVSSQAPVVSEVVIAAADNYAPVQVLQYAIDAVHSFTGLNWWAAIVLTTVLIRTATVPLLINQLKATSKLTLMRPHLEAIKEEMDGKTFDPEAVAEGQKRMKRLFKEYGVSPFTPLKGLFIQGPVFISFFLAISNMAEKMPSFKHGGAFWFTDLSTPDALYIFPVLTALSFLIVVECNVQEGMEGNPMGDTMKKFSRILAFVSVPLTMGFPKAIFCYWITSNLFSLAYGTVLKVPGMKKTLGIPEIPAAPTSSPQSPFSIFPALKQPASAADSQSSSPVESPIESPKRPNKKTSSSAIISQRLRTLEKQVKGRKKNKKID* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2977 439 MobiDBLite consensus disorder prediction 384 439 - -
Tpr5g2977 439 Pfam 60Kd inner membrane protein 160 347 IPR001708 GO:0016021|GO:0032977
Tpr5g2977 439 PANTHER OXA1 70 413 IPR001708 GO:0016021|GO:0032977
Tpr5g2977 439 MobiDBLite consensus disorder prediction 384 422 - -
Tpr5g2977 439 PANTHER MITOCHONDRIAL INNER MEMBRANE PROTEIN OXA1L 70 413 - -
Tpr5g2977 439 TIGRFAM yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 159 346 IPR028055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2977 Tpr-Chr5 52779268 52785567 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2977 49 438 Chloroplast and Mitochondria Gene Families AT2G28800 23.762 1.40e-12 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2977 K03217 - gmx:100817052 588.956