Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2972 ATGGCTTCTTCCAATCTCACCAATCTCACAATTCCATCTTCTTCTACTTCTACTTCTCGTTCCCCCAACGATCCCAGCCCACAAATCATCTACAGTAGGTCACACTCCTTCGTCGGCCCTTCCCCTCGCTACCCTCCTCCCTCCGATAACAACTCTCTCTTCTTCCTCGACGAACTCGCCTCCAACAGCGACGAAGAAGAACAAGAATACCAAATCGAACAACAACGCAAATTCGGACCCTCCGATTTCCAAATTCTCAAAGTTATAGGACAAGGTGCCTTTGGCAAAGTGTTCATGGTAAGAAGAAAAGGTACAAATGAAGAAGATTCTTCCGATAACGATAACGGAATATTCGCCATGAAAGTTATGAGAAAAGACAACATAATTAAGAAAAATCATGTTGATTATATGAAAGCTGAAAGAGATATTCTCACTAAAGTTCTTCATCCTTTCATTGTTCCTCTTCGCTACTCTTTCCAAACTAAATCTAAATTATATTTGATTTTGGACTTTATAAATGGTGGCCATCTTTTCTTTCAATTATGTCGACAGGGAATTTTTAGTGAGGACGAGGCAAGGATTTACACTGCTGAGATTGTATCTGCTGTTTCACATCTTCACACCAAAGGCATCGTGCATCGAGATCTTAAACCTGAAAACATACTTATGGATTCTGATGGCCATGTGATGTTAACGGATTTTGGAATGTCGAAAGAGATTGACGAATCTGAGAGATCTAATTCTTTGTGCGGGACTACAGAATATATGGCACCGGAAATTCTTCTAGGTAAAGGCCATAACAAGGACGCAGATTGGTGGAGTGTCGGTGTTCTCTTGTATGAAATGATTACAGGAAAGGCACCATTTACACATACTAACAGGAAGAAGCTACAGGAGAAAATTATCAAAGAGAAAATTAAACTTCCACCATATCTTACCGGTGAAGCTCATTCTTTGCTCAAAGGATTGCTGCAAAAGGATCCGTCAACAAGGTTGGGCAGTGGGCCAAATGGACATGAACAGATAAAAAACCATAAATGGTTTAGGACAATCAATTGGAACAAATTGGAAGCAAGAGAATTGCAACCCAAGTTTAAACCAGCTGATGTGTCAGGAAAAGATTGCACAGCTAATTTTGATCGATGCTGGACAACGATGCCTCTTGAGGATTCACCAGCATCAACTCCTACAGGAGGTGACCATTTCCAGGGCTATACTTATGTGGCACCAAATCCTTGGCTTTCTTCTAGGTAA 1254 0.4091 MASSNLTNLTIPSSSTSTSRSPNDPSPQIIYSRSHSFVGPSPRYPPPSDNNSLFFLDELASNSDEEEQEYQIEQQRKFGPSDFQILKVIGQGAFGKVFMVRRKGTNEEDSSDNDNGIFAMKVMRKDNIIKKNHVDYMKAERDILTKVLHPFIVPLRYSFQTKSKLYLILDFINGGHLFFQLCRQGIFSEDEARIYTAEIVSAVSHLHTKGIVHRDLKPENILMDSDGHVMLTDFGMSKEIDESERSNSLCGTTEYMAPEILLGKGHNKDADWWSVGVLLYEMITGKAPFTHTNRKKLQEKIIKEKIKLPPYLTGEAHSLLKGLLQKDPSTRLGSGPNGHEQIKNHKWFRTINWNKLEARELQPKFKPADVSGKDCTANFDRCWTTMPLEDSPASTPTGGDHFQGYTYVAPNPWLSSR* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2972 417 Gene3D Phosphorylase Kinase; domain 1 81 391 - -
Tpr5g2972 417 Pfam Protein kinase C terminal domain 370 407 IPR017892 GO:0004674|GO:0005524|GO:0006468
Tpr5g2972 417 Coils Coil 56 76 - -
Tpr5g2972 417 ProSitePatterns Protein kinases ATP-binding region signature. 89 121 IPR017441 GO:0005524
Tpr5g2972 417 ProSiteProfiles Protein kinase domain profile. 83 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g2972 417 SMART serkin_6 83 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g2972 417 Gene3D Transferase(Phosphotransferase) domain 1 172 367 - -
Tpr5g2972 417 MobiDBLite consensus disorder prediction 1 35 - -
Tpr5g2972 417 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 12 416 - -
Tpr5g2972 417 Pfam Protein kinase domain 83 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g2972 417 SMART pkinase_C_6 349 409 IPR000961 GO:0004674|GO:0005524|GO:0006468
Tpr5g2972 417 PANTHER RIBOSOMAL PROTEIN S6 KINASE 12 416 - -
Tpr5g2972 417 ProSiteProfiles AGC-kinase C-terminal domain profile. 349 417 IPR000961 GO:0004674|GO:0005524|GO:0006468
Tpr5g2972 417 ProSitePatterns Serine/Threonine protein kinases active-site signature. 211 223 IPR008271 GO:0004672|GO:0006468
Tpr5g2972 417 SUPERFAMILY Protein kinase-like (PK-like) 66 377 IPR011009 -
Tpr5g2972 417 MobiDBLite consensus disorder prediction 1 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2972 Tpr-Chr5 52735052 52738338 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2972 27 410 AGC Kinase Gene Family AT3G08720 61.179 4.42e-180 508
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC-Pl Tpr5g2972 Pkinase 4.8e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2972 K04688 - gmx:100798259 626.706