Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2957 ATGTCGCTCAAAAGGGGTCCCGATGATAACAAGACTTCAGATGATAAGCGTAGAAAGCCTCCTCCTTTTTGCAGTGTGGTGCGTGAGGTGATGAAGTTGCAATCAGTTAGGAATTTGATGGAACCGATTCTAGAGCCCTTGGTTCGTCGAGTGGTTAAGGAGGAAGTTGAATTGGCCCTAAAGAAGCATTTGAGCAGCATGAAACAGACTTGTGGAAAGGAGTTGATTACTAAGGAATTAAGAACTTTGCAGCTTCAGTTTGAAAACAGTATTTCTCTCCCCGTCTTCACAGGAGCTCGAATTGAAGGAGAAGATGGCTCAAACATAAGGATAAGATTAGTTGATGCTTTAACAGGGAAGGTTGTTTGTACAGGACCTGAATCTTCAGCTAAGGTAGAAATTGTAGTCCTTGAGGGTGATTTTGAAGAAGAAAGCGATGTTTGGATGCCTGAAGATTTCAAGAACAATATTGTGAGAGAGAGGGATGGAAAAAAGCCCCTCCTTACAGGAGATGTGATTTTATATCTTAAAGATGGGTTTTGTATGGTGGGTGAAATTTCATATACAGATAATTCAAGCTGGACAAGGAGCCGTAGGTTCCGGCTTGGAGCAAGAGTACTGGACAGCTTCGATGGTATTAGAATAAGAGAAGCAAAGACAGATTCATTTATTGTCAGGGATCACAGAGGAGAATTGTACAAGAAACACCACCCTCCAAGTCTGTCGGATGAAGTTTGGAGACTGGAAAAGATAGGCAAAGATGGAGCTTTCCACCGGCGTTTGAGCCGTGAAAAGATCCGCACCGTTAAAGATTTTCTCACACTACTCAATCTCGATCCATCAAAGCTGCGAACTATATTAGGCACTGGGATGTCTGCAAAGATGTGGGAAGTAACTGTAGAGCATGCTCGGACTTGTGTTCTTGATACAACAAGGCACGTGTCCTTCGCCGCTCATTCTCAACAACCTCATGTGGTCTTCAATGCCGTTGGACAAGTGACAGGACTGCTCTCTGAATCCGAGTATGTCGCTGTAGATAAGCTGTCTGAAACCGAAAAGGCTGATGCTCAAATCTCGGTTATTTCTGCACTTACCCAAGGCGATTTTGCCTCTTTAGAAGATGAAGCCTCCCTAATGGATGGTTATTCACACTTAACTAATGTACACTACTCCCCGAGCTCTCCGAGAACTGAGGGATCAAGTGCCAACAAGCTTTTGGCTCCGCAAAAGATTGGAGGGTTCAATTATACACAAGAAAGTGCCTCTTCTACAGATATCATGCCATCTATTTATTCGGTCGGTGGATCTAGTGGCTTGGATGACTATGGCTTGCCGAATTTTGACAGCATCGGCCTTAGATATGATCAGCATCTTGGCTTTCCAGTCCAAGTATCCAACTCTTTGATCTGCGACACAGATTCAATAGTCCATGCTTTCGGTGATGATGATCATATGCAATTTTTCGATGCTGATCTTCAATCTCAGTGCCATATTGAAGCAGATTTACAGCGTGCTGTTGATAGCTTCATGCTGGCACCTTCTCCATCTATGGCTAATGGAAAAGCTCAAAGACGATGGAGAAAGGTAGTCAATGTTCTAAAATGGTTCTTGGTGAGGAAACGACGAAACCAATTATATATATAG 1644 0.4331 MSLKRGPDDNKTSDDKRRKPPPFCSVVREVMKLQSVRNLMEPILEPLVRRVVKEEVELALKKHLSSMKQTCGKELITKELRTLQLQFENSISLPVFTGARIEGEDGSNIRIRLVDALTGKVVCTGPESSAKVEIVVLEGDFEEESDVWMPEDFKNNIVRERDGKKPLLTGDVILYLKDGFCMVGEISYTDNSSWTRSRRFRLGARVLDSFDGIRIREAKTDSFIVRDHRGELYKKHHPPSLSDEVWRLEKIGKDGAFHRRLSREKIRTVKDFLTLLNLDPSKLRTILGTGMSAKMWEVTVEHARTCVLDTTRHVSFAAHSQQPHVVFNAVGQVTGLLSESEYVAVDKLSETEKADAQISVISALTQGDFASLEDEASLMDGYSHLTNVHYSPSSPRTEGSSANKLLAPQKIGGFNYTQESASSTDIMPSIYSVGGSSGLDDYGLPNFDSIGLRYDQHLGFPVQVSNSLICDTDSIVHAFGDDDHMQFFDADLQSQCHIEADLQRAVDSFMLAPSPSMANGKAQRRWRKVVNVLKWFLVRKRRNQLYI* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2957 547 Pfam Calmodulin binding protein-like N-terminal domain 83 228 IPR046831 -
Tpr5g2957 547 PANTHER OS02G0177800 PROTEIN 8 541 IPR012416 GO:0005516
Tpr5g2957 547 PANTHER CALMODULIN-BINDING PROTEIN 60 A 8 541 - -
Tpr5g2957 547 Pfam Calmodulin binding protein C-terminal domain 319 368 IPR046829 -
Tpr5g2957 547 MobiDBLite consensus disorder prediction 1 21 - -
Tpr5g2957 547 Pfam Calmodulin binding protein central domain 240 306 IPR046830 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2957 Tpr-Chr5 52538120 52542868 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2957 5 354 Calmodulin-binding Proteins AT5G62570 61.538 7.65e-153 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2957 - - gmx:100793156 873.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2957 5 52538120 52542868 Tpr5g2957 5 52538120 52542868 ECH