Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2951 ATGAAAATGAAACAATATTTGCTGGAATGTACTCCATTTGCAGCAATGGTGATTGTAGAGTGCCTTGACGTGGGGTTGACCACATTGAGTAAAGCAGCCATGTCCAAAAAAGGAATGAATCATTTCATCTTTGTTCTCTATTCCAATGCTCTTGCCACTGTCATTCTCCTCCCTTCCTCTTTCCTCATCAACAGGACAACAAGACAACCCCTTTCTTTCTCCCTTCTTGGAAAATTCTTCTTCCTCGGCCTTCTCGGCATAACTATCATGCAGAATTGTGTATTCACTGGCATAAGCTATAGCTCTCCTACCCTTGGATCTGCTATGAGCAACTTGACTCCAGCAATCACTTTTGTTCTAGCAGTCATCTTCAGGATGGAGAAGTTGGATGTTGGAAGCTCAATAAGCCAGATCAAAATTGTGGGGACTGTTGTGTCTATCTCGGGAGCATTTCTAGTGACCTTTTACAAGGGCGCTCCCATTGGCAGCTTTCAAACTCGGCGTTCTACATTGCAACCATTGGTGTCTCTATCCGCAGAAACCGGTAACTGGGTCATTGGAGGTCTCTTCCTAGTCATTGCCACTATATCTCTTGCAGCATGGAATATTGCTCAGGCAGCAATTCTTAAAGGATATCCATCCCAGTTGACCATAGTTGCATTCTATTGCCTGTTTGGAACATTTCAATGTGCAATACTTTCTCTGATTGTAGTCAAAGATCCAAGTTCCTGGATACTAAGTCCTGACATTGAGCTAATCTCCATAATCTATTCAGCTATTTTCGGAAGTGTGGTGACATTTTCTGTACTTACTTGGTGCATAGATAGGAAAGGACCTCTATTTGTTACCATGTTCAAGCCTGTTGGGATTGCCATTGCTGCATTTATGAGTGTTGTCTTCCTTGGTGAAACACTCCATATTGGCAGTGTCATCGGCGCACTAGTAATCGCCATTGGATTTTACGCAGTAATGTGGGCACAATCTAGAGAGAAAAATATGAAAGGCCTTGAAGTTAATGGATTGCCATCATCCTCGTCTGCCCAAGAAAGTGCTCTACTAGAGTCTCCATGA 1071 0.4295 MKMKQYLLECTPFAAMVIVECLDVGLTTLSKAAMSKKGMNHFIFVLYSNALATVILLPSSFLINRTTRQPLSFSLLGKFFFLGLLGITIMQNCVFTGISYSSPTLGSAMSNLTPAITFVLAVIFRMEKLDVGSSISQIKIVGTVVSISGAFLVTFYKGAPIGSFQTRRSTLQPLVSLSAETGNWVIGGLFLVIATISLAAWNIAQAAILKGYPSQLTIVAFYCLFGTFQCAILSLIVVKDPSSWILSPDIELISIIYSAIFGSVVTFSVLTWCIDRKGPLFVTMFKPVGIAIAAFMSVVFLGETLHIGSVIGALVIAIGFYAVMWAQSREKNMKGLEVNGLPSSSSAQESALLESP* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2951 356 PANTHER WAT1-RELATED PROTEIN 8 348 - -
Tpr5g2951 356 PANTHER WAT1-RELATED PROTEIN 8 348 IPR030184 GO:0016021|GO:0022857
Tpr5g2951 356 Pfam EamA-like transporter family 27 154 IPR000620 GO:0016020|GO:0016021
Tpr5g2951 356 Pfam EamA-like transporter family 186 324 IPR000620 GO:0016020|GO:0016021
Tpr5g2951 356 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 156 - -
Tpr5g2951 356 SUPERFAMILY Multidrug resistance efflux transporter EmrE 253 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2951 Tpr-Chr5 52483541 52485739 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2951 4 334 Nodulin-like Gene Family AT5G40240 43.750 8.50e-89 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2951 - - ccaj:109809148 503.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g1768 2 20945919 20952512 Tpr5g2951 5 52483541 52485739 ECH
Tpr5g2951 5 52483541 52485739 Tpr5g2951 5 52483541 52485739 ECH