Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2937 ATGGCAGCTCGCACACTTTCTCGTCTGCTCTCTCGCTCTCTATCTTCTTCTGGAGGTTCTGCTTCTCTGCTTCGTTCATCACTAGGAACAAAATCTGAAGGGTGGATAAACAGAAACAGATTTAGCACCGCTGCAGCTGTTGAGGAATTGATTACTCCACAAGTTTCTATAAATTATACACAGCATCTCATAAATGGTCAATTTGTGGATGCTGCATCAGGGAAAACGTTTCCAACTTATGATCCACGCACAGGGGAAGTGATTGCTCAAGTTGCTGAAGGCGATGCTGAAGATATTAACCGTGCAGTATCAGCCGCTCGTGAGGCCTTTGATAATGGACCTTGGCCTAAAATGACTGCTTATGAAAGATGTCGTATTTTGCTGCGGTTTGCTGATTTGGTTGAGAAACACAATGACGAGATTGCAGCTTTGGAGTCATGGAACAACGGAAAGCTTTATGAACAGGCTGCGAAGGCTGAATTACCTATGTTTGTGCGTTTATTTCGCTATTATGCTGGATGGGCAGATAAAATTCATGGATTGACAGTTCCAGCTGATGGAGATTATCATGTCCAGACCTTGCATGAACCAATTGGTGTAGCAGGACAAATTATACCTTGGAATTTTCCTCTACTTATGTTTGCTTGGAAAGTTGGACCAGCTCTAGCATGTGGTAATACCATTGTCCTCAAGACTGCTGAGCAAACACCACTAACGGCTCTCGTTGTAGCAAAACTACTTCATGAGGCTGGTCTTCCCCCAGGTGTTCTGAATATAGTTTCTGGGTATGGTCCAACTGCTGGTGCACCTCTTGCAAGTCATATGGATGTAGACAAGTTAGCGTTTACCGGATCGACAGATACTGGAAAAACTGTACTTGAACTGGCTGCAAGAAGCAATCTTAAGCCAGTGACACTGGAACTTGGAGGGAAATCACCTTTCATTGTTTGTGAGGATGCTGATGTTAACAAGGCTGTTGAAATTGCACACTTTGCTTTGTTCTTTAATCAGGGGCAATGTTGCTGTGCTGGATCCCGTACCTTTGTACATGAGCGTATCTATGACGAGTTCTTGGAGAAATCAAAGGAACGAGCTTTGCGACGCGTTGTTGGTGATCCATTTAAGAAGGGTGTAGAACAAGGTCCTCAGATTGATTCGAAACAATTTGAGAAAGTGCTTAGGTACATAAAGTCTGGAATTGATAGCAATGCTATTCTTGAATGTGGAGGTGGGAGATTGGGTTCAAAAGGCTTCTTTGTCCAGCCAACTGTATTCTCCAATGTTCAGGATGATATGTTGATAGCAAAAGATGAAATCTTTGGCCCAGTTCAGACCATCTTGAAGTTCAAGGACATCGATGAAGTGATACGACGGGCAAATGCGACGCGTTATGGTTTAGCGGCAGGTGTTTTTACAAAAAATGTGAGCACGGCCAACACTATGATGAGGGCACTAAGAGCTGGAACAGTGTGGATTAATTGCTTTGATGTGTTTGATGCTGCGATTCCTTTTGGTGGTTACAAAATGAGTGGGATTGGTAGGGAGAAAGGAATATACAGTCTTCACAACTATCTGCAGGTAAAAGCTGTGGTATCCCCACTGAACAATCCTGCATGGTTGTATAAGTCACTTTCAGCTTATTCAGTGATCTCGAGTTTGAATCCACATTTTAGAAGTTATTGA 1683 0.4314 MAARTLSRLLSRSLSSSGGSASLLRSSLGTKSEGWINRNRFSTAAAVEELITPQVSINYTQHLINGQFVDAASGKTFPTYDPRTGEVIAQVAEGDAEDINRAVSAAREAFDNGPWPKMTAYERCRILLRFADLVEKHNDEIAALESWNNGKLYEQAAKAELPMFVRLFRYYAGWADKIHGLTVPADGDYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLTALVVAKLLHEAGLPPGVLNIVSGYGPTAGAPLASHMDVDKLAFTGSTDTGKTVLELAARSNLKPVTLELGGKSPFIVCEDADVNKAVEIAHFALFFNQGQCCCAGSRTFVHERIYDEFLEKSKERALRRVVGDPFKKGVEQGPQIDSKQFEKVLRYIKSGIDSNAILECGGGRLGSKGFFVQPTVFSNVQDDMLIAKDEIFGPVQTILKFKDIDEVIRRANATRYGLAAGVFTKNVSTANTMMRALRAGTVWINCFDVFDAAIPFGGYKMSGIGREKGIYSLHNYLQVKAVVSPLNNPAWLYKSLSAYSVISSLNPHFRSY* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2937 560 Pfam Aldehyde dehydrogenase family 68 530 IPR015590 GO:0016491
Tpr5g2937 560 SUPERFAMILY ALDH-like 54 534 IPR016161 GO:0016491
Tpr5g2937 560 CDD ALDH_F2BC 57 531 - -
Tpr5g2937 560 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 312 501 IPR016163 GO:0016620
Tpr5g2937 560 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 31 540 - -
Tpr5g2937 560 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 334 345 IPR016160 GO:0016491
Tpr5g2937 560 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 74 530 IPR016162 GO:0016491
Tpr5g2937 560 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL 31 540 - -
Tpr5g2937 560 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 306 313 IPR029510 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2937 Tpr-Chr5 52391388 52395161 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2937 1 540 Aldehyde Dehydrogenase Gene Family AT3G48000 78.148 0.0 893
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2937 K00128 - gmx:100811501 939.873
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0385 3 4141578 4146811 Tpr5g2937 5 52391388 52395161 ECH
Tpr5g2937 5 52391388 52395161 Tpr5g2937 5 52391388 52395161 ECH