Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2918 ATGCAGGCTACCCTTTTACCTCTAACCCCTTCTCTCTCTCTCTACAAATCTCAATCCTCTCTCTCTTCATCTTCTTCTTCTTCTTCTTCCATTTTCAACCCTTCTTTCTCTTCCTCTTCTTTCCCATCATCATGGAAATTACCTCTTGTTTCTTCTTCTTCTTCTTCAAAACTAATCTCCTTGACACCCCTTCATTCATCCAACCATTTACAAACCAAAGCAACAACCACCGCAGCCGCCGACTCCTCCTCCGAAAGCAGCAGTCTATTCAAAGCTTTAGAGCTTGGGATTCTTTTTTGCCTATGGTTCTCCTTTAACATCTACTTTAATATCTACAACAAACAGGTCTTAAAGGTTTATCATTTACCTGTAACTCTAACTGCGGTTCAATTTGCTATTGGGACACTCCTTGTAGGATTCATGTGGGGTCTTAATCTTTATAAAAGGCCAAAACTTACTTCTTCACAGCTTTTAGCAATATTTCCATTGGCTTTGGTACATACATTAGGGAACCTTTTCACTAATATGAGTCTTGGAAAAGTTGCTGTCTCTTTTACACATACTGTTAAATCAATGGAGCCTTTCTTTTCTGTCCTTCTGTCTTCTATGTTCCTTGGAGAGATGCCTACAGCATGGGTGGTTTTTTCCCTTGTGCCTATTGCTGGTGGAGTGGCGCTGGCATCTGCTACGGAAGCCTCTTTCAATTGGGTTGGGTTTTTGAGTGCAATGGCTTCCAATTTGACGAATCAATCTCGTAATGTTCTTAGCAAAAAACTCATGGTTAACAAGGAGGAATCTGTGGACAACATAACACTCTTCTCAATAATAACAGTCATGTCATTCTTCCTATCATTACCTCTAGCTATCTTCATGGAGGGTGTCAAATTTACCCCCACTTACATTCAATCTGCAGGATTAGATGTTCAACAAGTGTACATAAGATCTCTTCTTGCCGCACTTTGTTTCCACGCGTACCAGCAAGTTGCTTATATGATACTGGAGAGGGTATCACCTGTTACACATTCAGTAGCAAACTGTTTGAAACGTGTGATAGTTATTGTAAGCTCTGTCATTTTTTTCCAAACACCAGTCTCACCAATTAATGCATTAGGAACTGGTATAGCTCTTTCTGGTGTTTTCCTATATTCCAGGGTGACGCGAATTAAGCCTAAGACAGATTAA 1182 0.4019 MQATLLPLTPSLSLYKSQSSLSSSSSSSSSIFNPSFSSSSFPSSWKLPLVSSSSSSKLISLTPLHSSNHLQTKATTTAAADSSSESSSLFKALELGILFCLWFSFNIYFNIYNKQVLKVYHLPVTLTAVQFAIGTLLVGFMWGLNLYKRPKLTSSQLLAIFPLALVHTLGNLFTNMSLGKVAVSFTHTVKSMEPFFSVLLSSMFLGEMPTAWVVFSLVPIAGGVALASATEASFNWVGFLSAMASNLTNQSRNVLSKKLMVNKEESVDNITLFSIITVMSFFLSLPLAIFMEGVKFTPTYIQSAGLDVQQVYIRSLLAALCFHAYQQVAYMILERVSPVTHSVANCLKRVIVIVSSVIFFQTPVSPINALGTGIALSGVFLYSRVTRIKPKTD* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2918 393 Pfam Triose-phosphate Transporter family 94 383 IPR004853 -
Tpr5g2918 393 SUPERFAMILY Multidrug resistance efflux transporter EmrE 140 228 - -
Tpr5g2918 393 SUPERFAMILY Multidrug resistance efflux transporter EmrE 307 385 - -
Tpr5g2918 393 PANTHER PLASTID PHOSPHATE TRANSLOCATOR 30 388 - -
Tpr5g2918 393 PANTHER SOLUTE CARRIER FAMILY 35 30 388 - -
Tpr5g2918 393 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 93 391 IPR004696 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2918 Tpr-Chr5 52260775 52264280 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2918 8 391 Antiporters AT5G33320 64.824 6.59e-169 476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2918 K15283 - jre:109004219 497.278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2918 5 52260775 52264280 Tpr3g2767 3 28414420 28417792 ECH
Tpr5g2918 5 52260775 52264280 Tpr5g2918 5 52260775 52264280 ECH
Tpr5g2918 5 52260775 52264280 Tpr5g2918 5 52260775 52264280 PCT