Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2909 ATGCAAAATTTCAACATTTTATGGGGAATCATCATATTCATAATACCGTGGTTTTTGTCACGTGTGGCTTGCTTCAATGGTGGGATACACGAAGCCGGTCTGATTTGTGATTCTTATCAGTACCCTGCCGATGATGATGATGATGGTGATGATAGTGACAACAAGTTAATGCAAAACTGGATGGTTGTAATGGATGCCATTTCATTTCAGGTGAAAGAACACGGGTGGGGAGCGCAAACATTAGTTGGTAATTGGCATCCAATGTATGCATTAGGCCAATGTCGTCGTGATCTCAATCCCACACAATGTTATACATGTTTTACCCAAGCTAGACAGTTGTTATCAAGGTGTGTGCCAAATATTTCAGGTAGAATTTACCTTAACGGTTGCTTCCTTCGTTATGACAACTATGCTTTCTTCGAAGAGACCGTGGACAACACACATGACACAAACATGTGTGGGCCTACGGAAAGGGGAGAGACGGTGGATCCCTCACATGTTACGTCAGTAATTTTGAATGTGAGTAAAGGTGAACATAGGTTTGCGGTGGATGAGGAAGGTGGGGTGTTTGCGTTTGCGCAATGTTGGGAGACAGTGGATAAATGGGGTTGTCAAAGATGTTTGAGAGAAGCGGCGAAAAGAGTGCAGGAATGTGTTCCTAATACTGAGGGTAAAAGCTTGTTTACTGGTTGTTTTATGAGGTATTCAACGCGTAAATTCTACAACGACGTTGTTGTGCTAAATGATAGATGGACTCCTTCTCCTCGAGAAAAGCATAAGTGGATAATCCTTGGATGTGTAATATCAGCAATTCTAGTCATCTTACTTATCATCCCTAGTTACTCGAATCGATCTTTAGGGAACAAGAATTTTGGTGCATCCCCTAGTTTTGCGAATGTAGCTGGTTTTAGTTTTAGGTATGATGTGCTTGAGAAGGGAACGGATCATTTTGATCCGACAAACAAATTAGGCATGCAGGGAGACGGAAATCATGGTTCTGTGTACAAAGCAATACTCCCATCAGGAAGAACCGTTGCTGTTAAACGTTTGTTTTTCGATACACGACAATGGACAGATGTGTTATTCAATGAGATCAATTTGATTCATGGAATTCAACATAAGAATGTGGTGAAACTTTTGGGGTGTAGCAATGATGGCCCCGAAAGCCTCTTGGTTTATGAATTTCTTCCCAATAAAAGTCTTGATCAAATCCTTTTCGGTAAAGACGCAGAAAATGTTCTAGCTTGGGAGAAGCGGTTTCAAATCATATGTGGGATAGCTGAGGGATTAGCATATCTTCATGAAGGATCTGGATCAAAGATTGTTCACAGAGACATAAAGTCCAGCAATATTTTACTTGATGAAGCTCTAAATCCCAAAATTGTTGATTTTGGTCTAGCTCTTTGTGTTGCTGAAAAGAAATCTCATATTAACACCACTAAAATTGCAAAGACATTGGGACAAACGGCTCCCGAGTGTATCGACCGAGGACAACTTACAGAGAAGGTCGATATATATGCTTTTGGTATGATGGTTATTGAAATTATCTGTGGTAAAAAGAATGGTGTTTTCACACAAGGGTCAGATTCACTACTCCACTATGTGTGGAAGAATTACATGGGAAACAATATTACAATATCAGTTGATCATGCTTTGCATGGAAATTTTGTGGAAGAACAGGCATCAAATGCTCTTCAAGCTTCTCTTCTTTGTACACAATCTTCTCCTACTCTTAGACCATCCATGTCAGAAGTAGTTCAAATGCTAACAAAAAAAGACTACATTATTCCCATCCCAAAAGAACAACCATTCCTTAATTATACGAAACACCGAACCTTAGCGTCGACTATGAGCATTATGTCGAATGGTCTTACAAGTGCAAGATCATCTTTTCATAGCACCACTAGTTCTTTACATCCAGGTGAAGATGCAATACTGCTAGAGAATCTACCTCAACCAAGGTAG 1965 0.4005 MQNFNILWGIIIFIIPWFLSRVACFNGGIHEAGLICDSYQYPADDDDDGDDSDNKLMQNWMVVMDAISFQVKEHGWGAQTLVGNWHPMYALGQCRRDLNPTQCYTCFTQARQLLSRCVPNISGRIYLNGCFLRYDNYAFFEETVDNTHDTNMCGPTERGETVDPSHVTSVILNVSKGEHRFAVDEEGGVFAFAQCWETVDKWGCQRCLREAAKRVQECVPNTEGKSLFTGCFMRYSTRKFYNDVVVLNDRWTPSPREKHKWIILGCVISAILVILLIIPSYSNRSLGNKNFGASPSFANVAGFSFRYDVLEKGTDHFDPTNKLGMQGDGNHGSVYKAILPSGRTVAVKRLFFDTRQWTDVLFNEINLIHGIQHKNVVKLLGCSNDGPESLLVYEFLPNKSLDQILFGKDAENVLAWEKRFQIICGIAEGLAYLHEGSGSKIVHRDIKSSNILLDEALNPKIVDFGLALCVAEKKSHINTTKIAKTLGQTAPECIDRGQLTEKVDIYAFGMMVIEIICGKKNGVFTQGSDSLLHYVWKNYMGNNITISVDHALHGNFVEEQASNALQASLLCTQSSPTLRPSMSEVVQMLTKKDYIIPIPKEQPFLNYTKHRTLASTMSIMSNGLTSARSSFHSTTSSLHPGEDAILLENLPQPR* 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2909 654 SUPERFAMILY Protein kinase-like (PK-like) 304 622 IPR011009 -
Tpr5g2909 654 Pfam Salt stress response/antifungal 83 137 IPR002902 -
Tpr5g2909 654 Pfam Salt stress response/antifungal 181 237 IPR002902 -
Tpr5g2909 654 SMART serkin_6 320 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g2909 654 ProSiteProfiles Gnk2-homologous domain profile. 141 240 IPR002902 -
Tpr5g2909 654 Gene3D Phosphorylase Kinase; domain 1 296 395 - -
Tpr5g2909 654 ProSiteProfiles Protein kinase domain profile. 320 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g2909 654 Gene3D Transferase(Phosphotransferase) domain 1 396 596 - -
Tpr5g2909 654 ProSitePatterns Serine/Threonine protein kinases active-site signature. 441 453 IPR008271 GO:0004672|GO:0006468
Tpr5g2909 654 Gene3D - 49 139 IPR038408 -
Tpr5g2909 654 Gene3D - 155 240 IPR038408 -
Tpr5g2909 654 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 1 651 - -
Tpr5g2909 654 Pfam Protein kinase domain 327 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g2909 654 ProSiteProfiles Gnk2-homologous domain profile. 37 139 IPR002902 -
Tpr5g2909 654 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 1 651 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2909 Tpr-Chr5 52211363 52214315 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2909 59 606 Receptor kinase-like Gene Family AT1G70520 39.547 8.39e-134 405
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr5g2909 Pkinase 1.4e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2909 - - gmx:100780384 725.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2909 5 52211363 52214315 Tpr5g2909 5 52211363 52214315 ECH