Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2897 ATGCCTGTAAATCAATGGACCCTTTTTTTCTTATTCTTTTTCCTTTTACTTCCACACCATTCTTTTCTATCTTTTGCAGTAAACCCACAAGGGGAAGCTCTTCTTTCATGGAAGAGAACCTTGAATGGATCCTTGGAGATATTGAGTAATTGGGACCCAATTCAAGATACACCATGTAGCTGGTATGGAGTGAGTTGCAACATGAAGAACCAAGTAGTACAATTGGATCTGAGATATGTGGATTTGCTTGGAAAACTTCCAACAAATTTCACTTCATTGTTCTCCATGACTAGTCTTATCTTAACCGGAACGAATCTCACTGGTTCGATCCCAAAAGAATTAGGCAATCTTTTTGAACTCAGCTACTTGGACTTGAGTGACAATGCATTGAGTGGCGAAATCCCGAGTGAGCTTTGTTACTTGCCTAAACTCGAGGAACTTCATCTGAACTCGAATGAGCTTGTAGGGTCGATACCAATAGCAATTGGGAGCCTCACAAAGTTAACAAAGCTGATCTTATATGACAATCAGCTTAGTGGAAAAATTCCGAACACAATCGGTAACATGAAGAATCTTCGAGTGATAAGAGCTGGTGGAAACAAGAATCTAGAAGGACCTATACCACAAGAAATTGGAAACTGTTCCAATTTGATCATGTTGGGATTAGCAGAAACAAGCATCTCTGGTTTCATTCCACCAACAATTGGACTATTGAAGAAACTTGAAACATTGGCAATTTACACATCACTCCTCTCTGGCCAAATTCCACCCGAAATTGGTGACTGCACAAATCTTGAAAACATTTACCTTTATGAAAACTCACTCACAGGTTCCATTCCAACCAAATTAGGAAACCTTAACAATCTCAAAAACCTGTTACTCTGGCAGAACAACTTAGTTGGCACCATTCCCCAAGAGATTGGGAATTGTAACCAATTATCAGTGATCGACGCGTCAATGAATTCAATAACAGGAAACATTCCAAAAACCTTTGGAAATTTAACTTTGCTAGAAGAACTTCAACTGAGTGTGAACCAAATCTCTGGCGAAATTCCTGCAGAATTAGGCAACTGTCATCAACTAACTCACGTGGAGCTCGATAACAACCTGATAACCGGTACAATACCTTCCGAATTAGGTAACCTTGGGAATCTAACATTGTTGTTCTTATGGCATAATAGGTTACAAGGTAATATACCTTCATCTCTTTCTAATTGTGAAAACCTTGAAGCTATTGATCTGTCACAAAATGGATTAACAGGTCCAATACCGAAAGGGATATTCGAGCTCAAGAATCTGAATAAGCTTTTGCTTCTTTCTAATAATCTCTCTAGTAAAATCCCTTCTCAAATTGGGAATTGTTCATCTCTTATTCGCTTTCGAGCCAATAATAACAACATTACTGGTACCGTTCCTTCGGAGATTGGAAATCTTAAGAATTTGAATTTTCTTGACCTAGGGAGCAATAGAATAGAAGGGGTTATACCGGAGAAAATCTCCGGCTGCCGGAATCTTACCTTTTTGGACTTGCATTCCAATTCCATCGCCGGAAGTTTGCCGGAGAGTTTGAGTCAGCTTGTTTCTCTTCAATTTCTTGATGTCTCCGATAACATGATCGAAGGTGTATTAAGTCCTGCTCTCGGTTCTCTCGCTGCTCTCACCAAACTGATTCTCAGGAAGAATCGAATCTCCGGTTCGATTCCGATGAAACTCGGTTCATGTGTCAAGTTGCAGTTGCTGGACCTCAGCAGTAATCAACTCTCCGGTGAAATCCCCGGCAGCATCGGAGACATTCCGGCGCTGGAAATAGCTTTGAATCTGAGCACAAACCAACTCACCGGCGAGATTCCTAGGGAGTTTTCAGATTTAACGAAGCTCGGAGTACTTGACTTATCTCACAATGTTCTCGCCGGAAACCTAGATTATCTCGCCGGATTGGAAAATCTCGTGGTTCTCAATATCTCAAACAACAAATTCTCCGGTCACATTCCGAACACACCGTTCTTCGAGAAGCTTCCTATGAACGTTCTCTCAGGGAATCCTTCACTATGCTTCGTCGGCAACCAGTGCAGCGGCGATGGTGGTGGAAAATCAGGTCGCCGTGCGAGGGAAGCGCGCGTGGTGATGATCGTTCTTCTTTGCGTCGCGTGTGTTTTACTCATGGCGGCGCTGTATGTTGTCGTCGCAGCAAAACGACGCGGGGACCAAGAAAACGACGTGGAGCTAAATGGAAAAGACTGTGACGTGGACATGGTCCCACCTTGGGAGGTGACACTGTACCAAAAACTCGATCTGTCCATATCCGACGTGGTAAAATGCGTCTCTGCGGGCAACATTATCGGCCACGGCCGATCGGGCGTTGTTTATAAAGCTACCATGCCAGCAACGGGTTTAACCATCGCGGTTAAAAAGTTTCGTACGTCAGAGAAATTCTCAGCGTCGTCATTTTCTTCAGAGATTGCCACGCTAGCAAGAATCCGACACCGAAATATTGTCCGGTTATTAGGTTGGGGTGCAAACCGGAGGACAAAGTTACTGTTCTATGATTTTTTACCGAACGGTAATTTGGATGCAATGTTACACGAGGGGTGTACGGGATTAGCAGTCGAATGGGAGACACGACTTAAGATAGCTTTGGGTGTTGCCGAAGGTTTGGCTTATTTGCACCACGATTGTGTTCCTGCTATATTGCATCGAGATGTTAAGGCGCAAAATATTTTGTTGGGAGATAGATATGAAGCGTGTTTGGCTGATTTTGGATTCGCTCGTTTTGTTGAAGAACCTCGCTCTTCATTTTCCGTTAATCCTCAATTCGCAGGTTCTTACGGCTACATTGCTCCCGAGTATGCTTGTATGCTTAAAATAACAGAGAAAAGTGATGTATACAGCTTTGGTGTGGTACTACTAGAGATAATAACAGGGAAAAGACCAGTTGATCCATCATTCCCAGATGGAATTCATGTTATTCAATGGGTTAGGGAGCATTTAAAGAGTAAGAAGGATCCAATTGAGGTCATTGATTCCAAGCTTCAAGGTCATCCAGATACACAAATACAAGAGATGTTACAAGCACTTGGTATCGCTTTATTGTGTACTAGTAATCGAGCTGACGATCGGCCCACCATGAAGGATGTCGCTGCATTATTGAGAGAAATTCAACATGACACTACATCAGGTGCTGAACCCCACAAGCCTAAAAGATCCGAAGCTTCGTCGTATTCTTCTTCTTCGGTGACCCCAGCTCAATTGTTGCTTCTACAATCCAATTCACATTCCTCATCTATTTCCTATTCCTCTTCCTCAGCCGCGGCAGCCTACCATTCACCAAGGACGAGTTTGACATAA 3345 0.429 MPVNQWTLFFLFFFLLLPHHSFLSFAVNPQGEALLSWKRTLNGSLEILSNWDPIQDTPCSWYGVSCNMKNQVVQLDLRYVDLLGKLPTNFTSLFSMTSLILTGTNLTGSIPKELGNLFELSYLDLSDNALSGEIPSELCYLPKLEELHLNSNELVGSIPIAIGSLTKLTKLILYDNQLSGKIPNTIGNMKNLRVIRAGGNKNLEGPIPQEIGNCSNLIMLGLAETSISGFIPPTIGLLKKLETLAIYTSLLSGQIPPEIGDCTNLENIYLYENSLTGSIPTKLGNLNNLKNLLLWQNNLVGTIPQEIGNCNQLSVIDASMNSITGNIPKTFGNLTLLEELQLSVNQISGEIPAELGNCHQLTHVELDNNLITGTIPSELGNLGNLTLLFLWHNRLQGNIPSSLSNCENLEAIDLSQNGLTGPIPKGIFELKNLNKLLLLSNNLSSKIPSQIGNCSSLIRFRANNNNITGTVPSEIGNLKNLNFLDLGSNRIEGVIPEKISGCRNLTFLDLHSNSIAGSLPESLSQLVSLQFLDVSDNMIEGVLSPALGSLAALTKLILRKNRISGSIPMKLGSCVKLQLLDLSSNQLSGEIPGSIGDIPALEIALNLSTNQLTGEIPREFSDLTKLGVLDLSHNVLAGNLDYLAGLENLVVLNISNNKFSGHIPNTPFFEKLPMNVLSGNPSLCFVGNQCSGDGGGKSGRRAREARVVMIVLLCVACVLLMAALYVVVAAKRRGDQENDVELNGKDCDVDMVPPWEVTLYQKLDLSISDVVKCVSAGNIIGHGRSGVVYKATMPATGLTIAVKKFRTSEKFSASSFSSEIATLARIRHRNIVRLLGWGANRRTKLLFYDFLPNGNLDAMLHEGCTGLAVEWETRLKIALGVAEGLAYLHHDCVPAILHRDVKAQNILLGDRYEACLADFGFARFVEEPRSSFSVNPQFAGSYGYIAPEYACMLKITEKSDVYSFGVVLLEIITGKRPVDPSFPDGIHVIQWVREHLKSKKDPIEVIDSKLQGHPDTQIQEMLQALGIALLCTSNRADDRPTMKDVAALLREIQHDTTSGAEPHKPKRSEASSYSSSSVTPAQLLLLQSNSHSSSISYSSSSAAAAYHSPRTSLT* 1115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2897 1114 MobiDBLite consensus disorder prediction 1054 1068 - -
Tpr5g2897 1114 ProSitePatterns Serine/Threonine protein kinases active-site signature. 896 908 IPR008271 GO:0004672|GO:0006468
Tpr5g2897 1114 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 5 1070 - -
Tpr5g2897 1114 Pfam Protein kinase domain 777 1045 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g2897 1114 SMART LRR_typ_2 334 358 IPR003591 -
Tpr5g2897 1114 SMART LRR_typ_2 550 574 IPR003591 -
Tpr5g2897 1114 SMART LRR_typ_2 430 454 IPR003591 -
Tpr5g2897 1114 SMART LRR_typ_2 165 189 IPR003591 -
Tpr5g2897 1114 SMART LRR_typ_2 286 310 IPR003591 -
Tpr5g2897 1114 SMART LRR_typ_2 646 670 IPR003591 -
Tpr5g2897 1114 SMART LRR_typ_2 526 549 IPR003591 -
Tpr5g2897 1114 SMART LRR_typ_2 382 406 IPR003591 -
Tpr5g2897 1114 SMART LRR_typ_2 478 502 IPR003591 -
Tpr5g2897 1114 SMART LRR_typ_2 117 141 IPR003591 -
Tpr5g2897 1114 Pfam Leucine rich repeat 480 539 IPR001611 GO:0005515
Tpr5g2897 1114 MobiDBLite consensus disorder prediction 1054 1075 - -
Tpr5g2897 1114 PRINTS Leucine-rich repeat signature 577 590 - -
Tpr5g2897 1114 PRINTS Leucine-rich repeat signature 623 636 - -
Tpr5g2897 1114 SUPERFAMILY Protein kinase-like (PK-like) 762 1050 IPR011009 -
Tpr5g2897 1114 Gene3D Transferase(Phosphotransferase) domain 1 851 1074 - -
Tpr5g2897 1114 Gene3D Ribonuclease Inhibitor 433 691 IPR032675 -
Tpr5g2897 1114 Gene3D Phosphorylase Kinase; domain 1 757 850 - -
Tpr5g2897 1114 PANTHER OS01G0170300 PROTEIN 5 1070 - -
Tpr5g2897 1114 Gene3D Ribonuclease Inhibitor 140 218 IPR032675 -
Tpr5g2897 1114 ProSitePatterns Protein kinases ATP-binding region signature. 780 804 IPR017441 GO:0005524
Tpr5g2897 1114 SUPERFAMILY L domain-like 56 305 - -
Tpr5g2897 1114 SMART LRR_sd22_2 382 411 - -
Tpr5g2897 1114 SMART LRR_sd22_2 262 288 - -
Tpr5g2897 1114 SMART LRR_sd22_2 623 648 - -
Tpr5g2897 1114 SMART LRR_sd22_2 117 149 - -
Tpr5g2897 1114 SMART LRR_sd22_2 478 504 - -
Tpr5g2897 1114 SMART LRR_sd22_2 165 187 - -
Tpr5g2897 1114 SMART LRR_sd22_2 526 544 - -
Tpr5g2897 1114 SMART serkin_6 774 1049 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g2897 1114 Gene3D Ribonuclease Inhibitor 219 325 IPR032675 -
Tpr5g2897 1114 Gene3D Ribonuclease Inhibitor 326 426 IPR032675 -
Tpr5g2897 1114 Pfam Leucine rich repeat N-terminal domain 28 67 IPR013210 -
Tpr5g2897 1114 SUPERFAMILY RNI-like 267 640 - -
Tpr5g2897 1114 Gene3D Ribonuclease Inhibitor 29 139 IPR032675 -
Tpr5g2897 1114 ProSiteProfiles Protein kinase domain profile. 774 1057 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2897 Tpr-Chr5 52115826 52120661 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2897 25 1102 Receptor kinase-like Gene Family AT5G56040 53.775 0.0 1122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Tpr5g2897 Pkinase 3.4e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2897 - - gmx:100778064 1733.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2897 5 52115826 52120661 Tpr5g2897 5 52115826 52120661 ECH