Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2882 ATGTCTACCCTACTATTCCTCCACCTCCTCCTCCTCATCCCCACCATCCACTCCCTCGACTTCATCTACAACTCCTTCAACACAACCACCAAAATCAAACTCATCAACGACACCCGAATCGAATCCTCCGTAATCCGTATGACAAACGACTCCAACCAATTCTCTCTCGGTCGTTTCTTCTATCCTTCCAAAATCCCAATCACTTCCTTTTCCACTTCATTCATCTTCTCTATCTTACCTCAAAACCCTAACAGCCCCGGTTTCGGTCTCGCTTTTTTCCTATGCAACACAACTTCCCCTCCAGGCGCTATCGCTAGTCAATACTTCGGTTTATTCACTAACGCCGTAACCCCAACCATTTTCCCTCTCTTCGCTGTCGAATTCGATACCGGAAGAAACCCTGAGTTCAACGATCAAGATAACAATCACATCGGAATCGATCTCAATAATATTGAGTCAAAAACACAAACACCTGCTGGGTATTATAACTCCACCGGGAAATTTGTACCGGTGCAGATGAATAGCGGCGAAAATGTTCGAGCTTGGATTGAATTTAATGTTGATAGTTTGGAGATTAATGTTACAGTTGCTCCGGTTGGGGTTTCACGGCCTTTGAAACCGACGCTTACTTATAGAGATCCGAATATAAGTAATTATCTTTCTCCTGAAATGTTTGTTGGTTTTTCAGCTTCGAAAACGAATTGGATTGAAGCTCAAAGAGTTTTAGCATGGAGTTTTAGTGATTCAGGAACTGCTAAGGAGTTAAACACGACGAATTTACCGGTTTTTAAACGAGAATCGTCGAATTCGCTTTCGGGTAAAGCTATTGTTGGGATTGTAGTTGGTTGTTTTGTTTTAGTGTGTTTTAGTTTGGTTTTATTATATTTTCTATGGTGGAAAAGAAGAAGAAATGATGAAGAGGATGATGATGTGGAAGAATGGGAAATGGAGTATTGGCCTCATAGATTTTCTTATGAGGAACTATGCATAGCTACAAAGGATTTTCATAATGAGAAGCTTATAGGTTCTGGAGGGTTTGGAAGAGTTTACAAAGGAACGTTGGTGAATAAAACATTGATTGCGGTTAAGTGTGTTAATCATGATTCTAAACAAGGGTTAAGAGAGTTTATGGCAGAGATTTCAAGTATGGGAAGGCTTCAGCATAAGAATTTAGTGCAGATGAAGGGGTGGTGTAGAAAGGGTAATGAACTTATGTTGGTTTATGATTATATGCCTAATGGAAGTTTAAACAAGTGGGTTTTTGATAAACCTGAGAAAGTTTTGGGATGGAATCAGCGCCGTAGGATTCTTGTTGATGTAGCAGAAGGGCTTAACTATCTTCATCATGGTTGGGATCAGGTTGTTATTCATAGGGATATTAAATCTAGTAATATTTTGTTGGATGCTGATATGAGAGGAAGATTGGGAGATTTTGGTTTGGCTAAGCTTTACCAACATGGGCAAGTTCCTAATACTACACGTGTGGTGGGGACAATAGGGTATTTGGCGCCGGAAATAGCGAACGTTGCGGCACCGACTTCAGCGAGTGATGTGTATAGTTTTGGAGTGGTGTTGTTGGAAGTGGCTTGTGGAAGGAGGCCTTTGGAGGCGATGGTGGTGGATGAGGAAGTGGTGCTTATTGATTGGGTTAGGGAGTTGTATGCAAGAGGGTGTGTAGTTGAAGCTGCGGATAGTAGGATGAAGGGTGAGTATGATGTGGGTGATATGGAGATGGTGTTGAAGCTTGGGTTGGCTTGTTGTCATCCGGAGCCAAATAGGAGGCCGACTATGAAGGAAGTTGTCGCGCTTCTTCTTGGCGAGGATGTTGCGGATGCACCGGGGAAAGTTTTGTCCGATTTGGCTCGCGGTGATGATAATGGTGGTGGTGGCGGGGAATCGGATGAGGAGGCGCCTTTGCAATCCAACTCCCCTATTTGA 1938 0.4288 MSTLLFLHLLLLIPTIHSLDFIYNSFNTTTKIKLINDTRIESSVIRMTNDSNQFSLGRFFYPSKIPITSFSTSFIFSILPQNPNSPGFGLAFFLCNTTSPPGAIASQYFGLFTNAVTPTIFPLFAVEFDTGRNPEFNDQDNNHIGIDLNNIESKTQTPAGYYNSTGKFVPVQMNSGENVRAWIEFNVDSLEINVTVAPVGVSRPLKPTLTYRDPNISNYLSPEMFVGFSASKTNWIEAQRVLAWSFSDSGTAKELNTTNLPVFKRESSNSLSGKAIVGIVVGCFVLVCFSLVLLYFLWWKRRRNDEEDDDVEEWEMEYWPHRFSYEELCIATKDFHNEKLIGSGGFGRVYKGTLVNKTLIAVKCVNHDSKQGLREFMAEISSMGRLQHKNLVQMKGWCRKGNELMLVYDYMPNGSLNKWVFDKPEKVLGWNQRRRILVDVAEGLNYLHHGWDQVVIHRDIKSSNILLDADMRGRLGDFGLAKLYQHGQVPNTTRVVGTIGYLAPEIANVAAPTSASDVYSFGVVLLEVACGRRPLEAMVVDEEVVLIDWVRELYARGCVVEAADSRMKGEYDVGDMEMVLKLGLACCHPEPNRRPTMKEVVALLLGEDVADAPGKVLSDLARGDDNGGGGGESDEEAPLQSNSPI* 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2882 645 Pfam Legume lectin domain 18 260 IPR001220 GO:0030246
Tpr5g2882 645 SMART serkin_6 335 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g2882 645 ProSitePatterns Protein kinases ATP-binding region signature. 341 363 IPR017441 GO:0005524
Tpr5g2882 645 Gene3D Transferase(Phosphotransferase) domain 1 411 611 - -
Tpr5g2882 645 CDD STKc_IRAK 341 604 - -
Tpr5g2882 645 Gene3D Phosphorylase Kinase; domain 1 304 410 - -
Tpr5g2882 645 ProSiteProfiles Protein kinase domain profile. 335 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g2882 645 Pfam Protein kinase domain 335 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g2882 645 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.1 4 636 - -
Tpr5g2882 645 ProSitePatterns Serine/Threonine protein kinases active-site signature. 455 467 IPR008271 GO:0004672|GO:0006468
Tpr5g2882 645 Gene3D - 17 264 - -
Tpr5g2882 645 CDD lectin_legume_LecRK_Arcelin_ConA 19 250 IPR001220 GO:0030246
Tpr5g2882 645 SUPERFAMILY Protein kinase-like (PK-like) 312 604 IPR011009 -
Tpr5g2882 645 MobiDBLite consensus disorder prediction 616 645 - -
Tpr5g2882 645 SUPERFAMILY Concanavalin A-like lectins/glucanases 17 264 IPR013320 -
Tpr5g2882 645 PANTHER - 4 636 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2882 Tpr-Chr5 51966614 51969001 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2882 18 611 Receptor kinase-like Gene Family AT1G15530 63.502 0.0 765
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Tpr5g2882 Pkinase 7.8e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2882 - - gmx:100780660 958.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2882 5 51966614 51969001 Tpr5g2882 5 51966614 51969001 ECH