Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2881 ATGGAATCAAATCCCAAAAATACCATCAAATTTCTCTTTAGCTACGGTGGCAAAATCCTCCCCCGCCTCACCGACGGCAAGCTTCGCTACTCCGGCGGCCACACTAGAGTCCTCGCAATCCCTCCCCACATTTCTTTCTCAGGATTAATGGTGAAGCTTATGGAATTGTGTGGTTCAACATCGGTAACATTAAAATGTCCATTACCAAATGGAGATTTGGAGACATTGATTTCAATCACCAATGATGTGGATCTAGCAAACATAATTGAAGAATATGATCGAGCTTCTTCATCATTAACTCATCCATTGAAGATCAGAGCCATTCTTTCACCGCTCAAATCTCTCAAGAAACTATCTCCTCCTCCGTCTTCTTCATCTAGTGCAGCTCACTCTCCGTCTGGTTCGCTTCATACATCTGCAGAATCACTGCCGTATGCGGCTATGAATCGAATTAACCGCCTGAATTGCTCGCCGGTTTCGGTTGGTTATCCGATTGGGATTCGGAATGGAGTGAAAGGTAGTTGTTACAAAGGGAAGTTAGATGGAAGCCCTAGGTTTCTTTATCGCTTCTGTAATAATTATTGCCACTGA 591 0.4382 MESNPKNTIKFLFSYGGKILPRLTDGKLRYSGGHTRVLAIPPHISFSGLMVKLMELCGSTSVTLKCPLPNGDLETLISITNDVDLANIIEEYDRASSSLTHPLKIRAILSPLKSLKKLSPPPSSSSSAAHSPSGSLHTSAESLPYAAMNRINRLNCSPVSVGYPIGIRNGVKGSCYKGKLDGSPRFLYRFCNNYCH* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2881 196 PANTHER PB1 DOMAIN PROTEIN 1 196 - -
Tpr5g2881 196 SUPERFAMILY CAD & PB1 domains 25 115 - -
Tpr5g2881 196 SMART PB1_new 23 112 IPR000270 GO:0005515
Tpr5g2881 196 CDD PB1_UP2 14 107 - -
Tpr5g2881 196 Pfam PB1 domain 25 97 IPR000270 GO:0005515
Tpr5g2881 196 Gene3D - 27 109 - -
Tpr5g2881 196 PANTHER OS05G0427100 PROTEIN-RELATED 1 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2881 Tpr-Chr5 51949424 51950615 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2881 9 111 MAP Kinase Kinase Kinase AT1G04700 44.660 1.07e-18 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2881 - - mtr:MTR_4g105020 248.054
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2881 5 51949424 51950615 Tpr5g2881 5 51949424 51950615 ECH
Tpr5g2881 5 51949424 51950615 Tpr7g2145 7 27831310 27832313 PCT