Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2867 ATGGTATGCCTAATTCTAAGTGTAACATATATGTTTGGAAAAGCAATGGCTCTCAAAAAATGGTCACAAGAACAAATTATAGGAGCTTTTTGTTCTCCCTTATGTCTATCTCTCTTTTTCCTTGTAAGTGTGTTGATTGTGTTTAACTTTGCAATTAGAAAACCCAAACCTAAATCCAAAAATCAACTTCCATCTCCACCTAAATTACCTATCATTGGTAACCTTCATCAACTAGGCACACTTCCACACCGTTCTCTTAGAGACCTATCACTCAAATATGGCAACATGATGTTGTTACAATTGGGACAAAAACCAACTCCAACTCTAGTGGTTACTTCAGCAGATGTAGCCATGGAAATCATGAAAAAATATGATAAAGTTTTTTCAAACCGACCCCAACATATAGCTCCAAAAATCTTGTTGTATGGATGCAACGATGTTGGTTTTGCACTTTATGGAGAAAATTGGAAACAAAAAAGAAAATTATGTGTTGGAGAATTATTAAACATGAAAAGTGTGCAATCATTTTATCCCATTAGAGAAGAAGAAGTTGAAGAGTTGGTGAATAAGCTAAGAGAAGCTAGCTTGAATGATGCATGTGTGAATATAAGTGAAATGCTTATTTCAATAATAAACAATATTGTTTGTAAATGTGCTGTTGGAAGGAAGTTTGATGAAGCTAGTGAAGGCAATTTGAATATGTTAGCAAGGAAGGTTATGATTTATCTTACAACTTTTGTTTTTGGAGATTACTTCCCTTCTTTGAGTTGGATTGATGTTCTTAGTGGAAAAATTAGAGAATTTAAGGATACTTTTCAAGCACTTGATGGTTTCTTTGATCAAGTGATTGAAGAGCGTTTGGCTTTGAAGAAGATGGAAAATAATCAATTCAAGAAAAAAGGGTTTTTGGATATTCTACTTCAACTCCAAGAGGATGGCATGCTTGGCTTTGAGTTCTCCAATAATGATATCAAAGCAATTCTAATGGACATGTTTGTTGGAGGAATTGACACAACCTCAGCAATGTTGGAATGGACAATTTCAGAGCTTGTGAGACATCCAATCATAATGAATAAAGCACAGGAAGAAGTAAGAAGAATTGTTGGAAATAAATTAAAAGTTGAAGAAAATGACATCAACCAAATGCACTATTTAAAGTGTGTAGTGAAAGAAAGTCTAAGGTTACATCCGGCTACTGCTCTCATTCCTCCTAGAGAAACAATGTCTAGTGTGAATCTAAATGGATATGATATTCCTGAAAAAACAATGGTATATGTGAATGCATGGGCAATACAAAGAGACCCTAAAAATTGGGAGAACCCTGAAGAGTTCATGCCAGAGAGATTTGAACACAGCATAGTTGATTTTATAGGTCAAGATTTTCAGTTTATCCCTTTTGGTTTTGGGAGAAGGGGGTGTCCTGGAATGAATTTTGGAGTAACTACTGTTGAACATGTACTTGCTACCCTTCTTTATTGGTTCAATTGGAAGCTACCAACTGAAACAAACTTTGGTCAGCAAGATATAGATATGAACGAAGTATTTGGACTTGTTGTCACAAAGAAAGAACCTCTTCACCTTAAACCAATAGCATTTTTTGTTTAA 1605 0.3477 MVCLILSVTYMFGKAMALKKWSQEQIIGAFCSPLCLSLFFLVSVLIVFNFAIRKPKPKSKNQLPSPPKLPIIGNLHQLGTLPHRSLRDLSLKYGNMMLLQLGQKPTPTLVVTSADVAMEIMKKYDKVFSNRPQHIAPKILLYGCNDVGFALYGENWKQKRKLCVGELLNMKSVQSFYPIREEEVEELVNKLREASLNDACVNISEMLISIINNIVCKCAVGRKFDEASEGNLNMLARKVMIYLTTFVFGDYFPSLSWIDVLSGKIREFKDTFQALDGFFDQVIEERLALKKMENNQFKKKGFLDILLQLQEDGMLGFEFSNNDIKAILMDMFVGGIDTTSAMLEWTISELVRHPIIMNKAQEEVRRIVGNKLKVEENDINQMHYLKCVVKESLRLHPATALIPPRETMSSVNLNGYDIPEKTMVYVNAWAIQRDPKNWENPEEFMPERFEHSIVDFIGQDFQFIPFGFGRRGCPGMNFGVTTVEHVLATLLYWFNWKLPTETNFGQQDIDMNEVFGLVVTKKEPLHLKPIAFFV* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2867 534 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 27 531 - -
Tpr5g2867 534 SUPERFAMILY Cytochrome P450 64 529 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g2867 534 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 466 475 IPR017972 GO:0005506|GO:0016705
Tpr5g2867 534 PANTHER CYTOCHROME P450 71B11-RELATED 27 531 - -
Tpr5g2867 534 Coils Coil 357 377 - -
Tpr5g2867 534 Pfam Cytochrome P450 64 522 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g2867 534 PRINTS E-class P450 group I signature 90 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g2867 534 PRINTS E-class P450 group I signature 210 228 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g2867 534 PRINTS E-class P450 group I signature 323 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g2867 534 PRINTS E-class P450 group I signature 343 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g2867 534 PRINTS E-class P450 group I signature 386 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g2867 534 PRINTS E-class P450 group I signature 427 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g2867 534 PRINTS E-class P450 group I signature 463 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g2867 534 PRINTS E-class P450 group I signature 473 496 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g2867 534 PRINTS P450 superfamily signature 334 351 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g2867 534 PRINTS P450 superfamily signature 387 398 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g2867 534 PRINTS P450 superfamily signature 464 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g2867 534 Gene3D Cytochrome P450 48 530 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2867 Tpr-Chr5 51838142 51842023 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2867 64 533 Cytochrome P450 AT3G26330 43.368 6.18e-132 391
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2867 K20617 - gmx:100781909 651.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2867 5 51838142 51842023 Tpr7g2160 7 28265458 28267627 PCT