Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2866 ATGTTCTATATATATGGTATGCCTAACTCTAAGTGCAACATATGTTTATTAAAAAACCCAATGGCTCTCAAAAAATGGTCACATGAACAAATTATAGGAGCTTTTTGTTCTCCCTTATATCTATCTCTCTTTTTCCTTGTAAGTGTATTGATTGTGTTTAACTTTGCAATTAGAAAACCCAAATCTAAATCCAAAACTAATCAACTTCCATTTCCACCTAAACTACCTATCATTGGTAACCTTCATCAACTAGGCACACTTCCACACCGTTCTCTTAGAGACCTATCACTCAAATATGGCAACATGATGTTGTTACAATTGGGACAAAAACCAACTCCAACTCTAGTGGTTACTTCAGCAGATGTAGCCATGGAAATCATGAAAAAATATGATAAAGTTTTTTCAAACCGACCCCAACATATAGCTCAAAAAATCTTGTTGTATGGATGTAATGATGTTGGTTTTGCACTTTATGGAAAAAATTGGAAACAAAAAAGAAAATTATGTGTTGGAGAATTATTAAACATGAAAAGTGTTCAATCATCTTATCCCATTAGAGAAGAAGAAGTTGAAGAGTTGGTGAATAAGCTAAGAGAAGCTAGCTTGAATGATGCATGTGTGAATCTAAGTGAGATGCTTATTTCAACAATAAATAATATTGTTTGTATATGTGCTCTTGGAAGGAAGTATGAAGAAACTAGTGATGGCAATTTGAAAGTGTTAGCAAGGAAAGTTATGATGTATCTTGCAACTTTTGTTGTTGGAGATTACTTCCCTTCTTTGAGTTGGATTGATGTTCTTAGTGGAAAAATTGGAGAAATGAAGGATACTTTTCAAGCATTTGATGGTTTCTTTGATCAAGTGATTGAAGAGCGTTTGGCTTTGAAAAAGATGGAAGATAATCAAATCAAGAAAAAAGGGTTTGTGGATATTCTACTTCAACTCCAAGATGATGGCATGCTTGGATTTGAGTTCTCCAATAATGATATCAAAGCACTTCTAATGGACATGTTTATTGGAGCAACTGACACAACCTCAACAACATTAGACTGGACAATTTCAGAGCTAATGAGACATCCAACCGTAATGAAAAAAATACAGGAAGAAGTAAGAAGAGTTGTTGGAAATAAATCAAAAGTTGAAGAAAATGACATCAACCAAATGCACTATTTAAAATGTGTAGTGAAAGAAAGTCTAAGGTTACATCCAGCTACTCCTCTCATGGCTCCTAGAGAAACCATATCTAATGTAAATCTAAAAGGTTATGATATTCCTGAAAAAACAATGGTATATGTAAATTCATGGGCAATACAAAGAGACCCTAAAAATTGGGACAACCCTGAAGAGTTCATGCCAGAGAGATTTGAACACAGCATAGTTGATTTTATAGGTCAAGATTTTCAGTTTATCCCTTTTGGTTTTGGGAGAAGGGGGTGTCCTGGAATGAATTTTGGAGTAACTACTGTTGAATATGTACTTGCTAGCCTTCTTTATTGGTTCAATTGGAAGCTACCAAATGAAACAAATTTAGGTAAACAAGATATAGATATGAATGAGGTATTTGGACTTGTTGTCTCAAAGAAAGAACCTCTTCACCTTAAACCAATAGCATTTTTAGCATAA 1623 0.3395 MFYIYGMPNSKCNICLLKNPMALKKWSHEQIIGAFCSPLYLSLFFLVSVLIVFNFAIRKPKSKSKTNQLPFPPKLPIIGNLHQLGTLPHRSLRDLSLKYGNMMLLQLGQKPTPTLVVTSADVAMEIMKKYDKVFSNRPQHIAQKILLYGCNDVGFALYGKNWKQKRKLCVGELLNMKSVQSSYPIREEEVEELVNKLREASLNDACVNLSEMLISTINNIVCICALGRKYEETSDGNLKVLARKVMMYLATFVVGDYFPSLSWIDVLSGKIGEMKDTFQAFDGFFDQVIEERLALKKMEDNQIKKKGFVDILLQLQDDGMLGFEFSNNDIKALLMDMFIGATDTTSTTLDWTISELMRHPTVMKKIQEEVRRVVGNKSKVEENDINQMHYLKCVVKESLRLHPATPLMAPRETISNVNLKGYDIPEKTMVYVNSWAIQRDPKNWDNPEEFMPERFEHSIVDFIGQDFQFIPFGFGRRGCPGMNFGVTTVEYVLASLLYWFNWKLPNETNLGKQDIDMNEVFGLVVSKKEPLHLKPIAFLA* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2866 540 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 472 481 IPR017972 GO:0005506|GO:0016705
Tpr5g2866 540 Coils Coil 363 383 - -
Tpr5g2866 540 Gene3D Cytochrome P450 54 536 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g2866 540 PRINTS E-class P450 group I signature 96 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g2866 540 PRINTS E-class P450 group I signature 216 234 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g2866 540 PRINTS E-class P450 group I signature 329 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g2866 540 PRINTS E-class P450 group I signature 349 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g2866 540 PRINTS E-class P450 group I signature 392 410 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g2866 540 PRINTS E-class P450 group I signature 433 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g2866 540 PRINTS E-class P450 group I signature 469 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g2866 540 PRINTS E-class P450 group I signature 479 502 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g2866 540 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 32 537 - -
Tpr5g2866 540 SUPERFAMILY Cytochrome P450 70 535 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g2866 540 Pfam Cytochrome P450 70 523 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g2866 540 PRINTS P450 superfamily signature 340 357 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g2866 540 PRINTS P450 superfamily signature 393 404 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g2866 540 PRINTS P450 superfamily signature 470 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g2866 540 PANTHER CYTOCHROME P450 71B11-RELATED 32 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2866 Tpr-Chr5 51830003 51833087 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2866 58 532 Cytochrome P450 AT3G48270 43.396 5.66e-135 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2866 K20617 - gmx:100803384 659.833