Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2853 ATGGCCTCAAACTTGTGTAGCTGCCGGTGCTTTTTCATCTTCGTTGTCTTATCAATCTTCACTGTAACCCCAGCAACATCTCAGCCACAAACCTCAGATTCATGCAACGGAATATTCCTGTCGTACGCATATAACAGAGGTGCAAAGCTACCGCCGAACGTGTCTGATCAGGTGGAGCAACCGTACCGGTTTGAGTCGACACTAAGAGTGCTCAACAATGGACTCGTGGAGCTGAAGTCTTGGAAGGTATTCGTTGGGTTTCGGCACCAAGAGTGGTTGGTGTCGGCGTCCAATGCAGTCCTCGCCGACGGGAGAAGCATCCCAAGCGCAGTTGGGAATGGGACCATATTTGCAGGGTCTTCAGTAATTGATTTGAAGACAGCAGCAGAAACTGCAGGCGACTTAACGCAGATGCAGGTTCAGGTAGAAATGGTGGGGACAACATTAGGGGTTGCGCCACCAAGCGTTCCTATGCCTTCTACCATAAACCTTGCTAATGATGGATTCGTTTGTGGTGAACCCGCTTCTCAAGGGAACAATGAAACTCATGTATGTTGCAAAAGTGATCCCAATTTCAAGACAAAAATCACACCAAATGAAAAATTTCTACCTAGACAGAATGGTGATCTTACCATAATGTATGATGTGATCAAAGCATACAATTCCAATTATTGGGCAGAAGTAACAATTTCAAACCATAACACTCTAGGACGACTTGACAATTGGAAATTAAGCTGGAATTGGACAAATGATGAATTTATCCACACAATGAAAGGTGCTTATCCATCAACTATAGATTCTTCAAACTGTATTTTTGGTTCACAAAGTGAATTTTACAAGGAACTTGATTTTTCTAATGTATTGAATTGTGAAAAAAGACCAACAATAATTGATTTACCTCCAACAAGGTTCAATGATACACAACTTGGTAAAGTACCATTTTGTTGTAGGAATGGTACTATACTACCACCACATATGGACCTTAGCATGTCAATTTCAAGGTTCCAAATACATGTCTTTAAAATGCCACCAAATATCAATCGGTCAAACCTTATACCGCCACAAAATTGGGAGATTAAAGGTGATACGATTAACCCTGATTACAAATGCGGCGCCCCGATTAGGGTTAGTCCTAGTCAATCTCAAGATCCAACAGGGTTACCTTCAAACATATCTTCAATTGCAAGTTGGCAAGTTGTGTGCAACATAACTACAAAGTCATCATCAAAAAGTGATTCTCCTAAATGTTGTGTCTCATTTTCAGCTTATTATAATGAATCAGTTATTCCTTGTAATACATGTGCATGTGGATGTCCTAGTAATCAAGAGAGAACATGTAGTGCTAATACACCAGCTATGTGGCTTCCATCAAAAGCACTTCTTTTTCCATTTGAGAATAGAAGTGAAATAGCACATAAATGGGCTAGGTACAAAAATTTACAAGTACCTAACCCTATACCATGTGGTGATAATTGTGGTGTGAGTATAAATTGGCATGTAAACACAGATGATAAAAAAGGTTGGACTGCAAGGATCACAATTTTTAACTGGGGTGAGACGGATTTCGCCGATTGGTTTGCTGCGGTGCAAATGGACAAAGGTGCAGTAGGTTTTAAGGAAATGTATTCATTCAATGGAAGCTTATTAGAGAAATTAAACAATACAATATTCATGCAAGGTAAGAAAGGATTGAACTTTCTTGTAGCAGAAGCAAATGGGTCAAACCCTCAAAGAGATCCGAGGGTGCCTGGGAAACAGCAGTCGGTAATTTTGTTTACGAAGAAAAAAAAGGATGAAATCAATGTGGCTGGTGGTGATGGTTTTCCTAGTAAAGTGTTCTTCAATGGGGAGGAATGTTCTCTCCCTTCGGTGTATCCAAGCAATGGTTTGAGGAATGAATTTTCCTCGGTTACTATTACGATCCTAATATTGTTGTCAATCATCTTGATGCAACAATGGTGA 1962 0.4021 MASNLCSCRCFFIFVVLSIFTVTPATSQPQTSDSCNGIFLSYAYNRGAKLPPNVSDQVEQPYRFESTLRVLNNGLVELKSWKVFVGFRHQEWLVSASNAVLADGRSIPSAVGNGTIFAGSSVIDLKTAAETAGDLTQMQVQVEMVGTTLGVAPPSVPMPSTINLANDGFVCGEPASQGNNETHVCCKSDPNFKTKITPNEKFLPRQNGDLTIMYDVIKAYNSNYWAEVTISNHNTLGRLDNWKLSWNWTNDEFIHTMKGAYPSTIDSSNCIFGSQSEFYKELDFSNVLNCEKRPTIIDLPPTRFNDTQLGKVPFCCRNGTILPPHMDLSMSISRFQIHVFKMPPNINRSNLIPPQNWEIKGDTINPDYKCGAPIRVSPSQSQDPTGLPSNISSIASWQVVCNITTKSSSKSDSPKCCVSFSAYYNESVIPCNTCACGCPSNQERTCSANTPAMWLPSKALLFPFENRSEIAHKWARYKNLQVPNPIPCGDNCGVSINWHVNTDDKKGWTARITIFNWGETDFADWFAAVQMDKGAVGFKEMYSFNGSLLEKLNNTIFMQGKKGLNFLVAEANGSNPQRDPRVPGKQQSVILFTKKKKDEINVAGGDGFPSKVFFNGEECSLPSVYPSNGLRNEFSSVTITILILLSIILMQQW* 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2853 653 Pfam COBRA-like protein 224 404 IPR006918 GO:0010215|GO:0031225
Tpr5g2853 653 PANTHER COBRA-LIKE PROTEIN 7 1 651 - -
Tpr5g2853 653 PANTHER COBRA-LIKE PROTEIN 7 1 651 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2853 Tpr-Chr5 51735746 51738157 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2853 35 626 COBRA Gene Family AT4G16120 62.689 0.0 796
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2853 - - mtr:MTR_2g034950 1157.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2853 5 51735746 51738157 Tpr5g2853 5 51735746 51738157 ECH
Tpr4g1955 4 20345548 20348824 Tpr5g2853 5 51735746 51738157 PCT