Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2846 ATGAGTGGTACTTCATCTAATAATCATATGCACAACATTGAAGAGAAACCTTCCTCTTCTCCCTCATCAACATTGAAGCTTTTTGGTTTCTCATTAACACCATCTAAAACCGTTCCTTGTCATCATAACAAGAAATTCATATGCCACTTCTGTCGCCGCGAATTTTCCAATTCTCAAGCATTAGGCGGCCATCAAAATGCTCACAAGAGAGAACGCCAAAGAGCGCATTTTCATTCCATTCTTCCACATCATCAACGCTTCGTACCATGTTCACCTTATCGTCCTATGATAGCACCACATGGAGCACCAAGAGTAGTGTTTTTGCATCCACGCCGCCAGTCACCGGATGCAATATGGAATAGACAACATTATGAAGAGGAGCCTAATGAGAATCCTTTGAATGCAACAACATCCACAAATAATGAACCTTCCATGCAAGTACACAATAATATTATTGATGGTGATGTTGATCTTAACTTGACTCTAGCTTGTGCACCTTTAAACTCCAAGGACAAAGAGTTTGGAAGGGAGTGA 534 0.4082 MSGTSSNNHMHNIEEKPSSSPSSTLKLFGFSLTPSKTVPCHHNKKFICHFCRREFSNSQALGGHQNAHKRERQRAHFHSILPHHQRFVPCSPYRPMIAPHGAPRVVFLHPRRQSPDAIWNRQHYEEEPNENPLNATTSTNNEPSMQVHNNIIDGDVDLNLTLACAPLNSKDKEFGRE* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2846 177 PANTHER ZINC FINGER PROTEIN 5 12 164 IPR044299 GO:0010090
Tpr5g2846 177 ProSitePatterns Zinc finger C2H2 type domain signature. 48 68 IPR013087 -
Tpr5g2846 177 ProSiteProfiles Zinc finger C2H2 type domain profile. 46 73 IPR013087 -
Tpr5g2846 177 MobiDBLite consensus disorder prediction 1 20 - -
Tpr5g2846 177 SUPERFAMILY beta-beta-alpha zinc fingers 42 73 IPR036236 -
Tpr5g2846 177 PANTHER ZINC FINGER PROTEIN 8-LIKE 12 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2846 Tpr-Chr5 51649144 51649767 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2846 19 99 C2H2 Transcription Factor Family AT1G67030 40.404 1.02e-12 61.6