Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2843 ATGGGAGTTGAAAAAGAAGGGACTAAAAGTGGAGGTAGTTTTTTCCATTTGTTTGATTGGACCTCGAAATCGCGCAAGAAATTATTTGCATCTAAGTCAGATTTACCAGAGTCTTTGAAACATGAAAGAAAAGCCAATCACAATGTCGCAATGAGACATCCATATCTGGTCGATGAAGACGAAAATGGTGTAGGGGAATATGTTAGAGGAAGTTGTGATAATAGTTATGCTTCATCTGTTACAAGTGATGACACATGTGGAACACGAGCTCCTAATGTAGTTGCAAGGCTCATGGGATTAGATTCTTTGCCTTCTTCCGGTTTCTCTGATCCTTACTCGACGCCATATTTTGAAACAAGATCCCTTCAAGATTCTCAGTTTCTATATTCTGGAAAGTTGGTTGAAAAAGTTGATGGATCGTCTAGCAACTTCGTGGAGCCAAAGCCTCAAAAGGTTATTACAAGACCAATTGAAAAGTTTCAAAGAGAAGTGTTACCTCCGAAATCGGCTAAATCGATTCCTGTTACACACCATAAACTTTTGTCCCCTATTAAGAATCCCGGCTTTGTTCCATCCAACAATGCTGCATATATAATGGAGGCTGCAGCGAGAATTATTGAACCTGGATCTTCCCAAGCAAAGGCTAAAACACATATGGCGGCATCATCGACAGTCTCACTGAGGGTAAAAGATGTTAGAGATAAGTTGGATTCTTCGCAGAAGGTACCTCTAATTACGACATCTTCCGTGGCTTTTAGGACTCGAGAGCTAAAAGAAAAAAGAGATATTTCTCAAAGAACAAGCAGGGTTTCAGAACGTTCTCAAAGGTCATCAGTCGAGTCGAATGCTGCAAAGTATTTAAAAGGACAGTCTTTGAACAGAAGCTGGAATGGAACTCCGGAAACATCTGTGAAGTCTCCTACAAATGCAGAAGAAGACTTTTCTTTGAAGAATAAAGGGAAGTCTGTTTTGTCTGCCGAAACATCTGCGAAGTCTCCTACACATGCAGAAGAAGACTTTTCTTTGAAGAATAAAGGGAAGTCTGTTTCGTCTGCGGAAACATCTGTAAAGTCTCCAACACATGCAGAAGAAGACTCTACTTTGAAGAATAAAGGGAAGTCTGTTTCGCTTGCAATCCAAGCAAAGGTAAATGTTCAAAGAAGGGAAGGTTTGAGTTCGACAGGTGGCAGAAACTTGATGGGCCAAAAAGAGCATGTCGACATTAAATCGAATCAGCCACTGCCTAAGGCAAATGCTCAGAAGAATTTGCATCGGAAATCTTCTGGCCAGAATTCTTCTAATGTTCTGAGGCAGAATAATCTGAAACAGAACCATTCAAATGATAATAACGACAGATTAGCACCATCTAAGCCATTGGTTTCCAATTCACAAGGAAGAAAAGTTACGACTGGAGATTCCCCTTACGGACGACACAGAAGCTCCAGTAGTAAATCTACTGCAAAATCTAAAGTTGGATCGAGAAAGTCAGCCGTGGAGGTGACAGATAGCGAAAACGAAATTCTATACACCAGCACAAACAATTTTCCAAGAAAGAAAAGGACTACGGACAAAGATTGGAACGATAGAGTTGTCGATAATTTGTTCATCGACAAAACTCCAAAGTCTGTTAAGTCGAATCTATCAAGTAATAAACAATATGGTTGGTCTGAAGAAGTGAAAAAGAAAGACATGGATGTAGTTTCCTTCACATTTACTACACCATTAACAAGGAGCAGCAGCAATCCAGGTTCTGAGACACCTCGACAAGATGGAAAGAATACTAATGAACTTTCATTAGATCAACGCATCAAAAGAGTGTTGCTAGATGCAGACAATACAAGGTCTCCAATAGGATACAATGTAATTGGTGGTGATGCCTTAGGTATTCTTCTAGAACAGAAGTTGAAGGAATTGAGTCAATTGACAAGTGGAGTTGAAACCTCTTCCATTACTGCACCAAAGTCAAATGATCAAGTAACCAACTTCAATATAGTTAACCTCAATCCAAGATCGGAGCAGAAGAAAGACCAAGATATGTCATTTACAGAAAGTTTAAGTGGTAGCCGTGGTTCTGACATGTCCTTCACCAATCTTCCAGAATCATCCTTGAAACATAAATCATGGGGTGATGAGATGGAACCATTGTCATTCAATTGCCGACAACCAAGTCCAATCTCAGTTCTTGAGCCTTCTTTTTCGATCGAAAGCTGTGAATCTTCGATAAGCGCAGACGTTACTAGTACAGAAGGAAGCAAAATGTTTTCGTCTCTTCAAGCCCAAGAAATTCATGGCTTTAATTTTTCAAGGAAGTTCTATCCAACCGAATGTGATGCAGAATTATCTGACTCAGCTTCTTCAACATCAACTAGGACTATGATGAAGAAGCAGAATAGTACATTTTCTGTGATGAAGTTCGGTAGATCATCAAGTACATGGGAGCTAGACTATGTGAAAGAGATACTATGTAATGTTGAGTTGATGTATATCGATTTTTCACTCGGTCGATCTCACGAAGTTGTTAACTCTCATCTCTTCAACCAGTTGGAAAGCCGAAAGGGAGGTTTCAAGAGTGACGATGAATCAAGAATAGAAAGGAAAGTTATATTTGATTGTGTGAGTGAATGTTTGGATTTGAGATGCAAAAGTTATGTAGGAGGAGGGTATAAAATGTGGATTAAAGGGTTTGAAATAGTGAAAAGAAAAGATTGGTTAGCAAAAGATGTGTACAAGGAAATTTTGGGTTGGAAAGGGATGAGAGATTCAATGGTTGACGAACTTGTGGACAAGGATATGAGTAGTCAATATGGAAAGTGGTTGGAGTTGGATTATGAGGTTGATGCTTATGAATTTGGTGAAGAAGTTGCTGATCAAATATTTAATTCTTTGGTTGATGATGTTGTCTATGATATGTTGCAATTTTAA 2922 0.3915 MGVEKEGTKSGGSFFHLFDWTSKSRKKLFASKSDLPESLKHERKANHNVAMRHPYLVDEDENGVGEYVRGSCDNSYASSVTSDDTCGTRAPNVVARLMGLDSLPSSGFSDPYSTPYFETRSLQDSQFLYSGKLVEKVDGSSSNFVEPKPQKVITRPIEKFQREVLPPKSAKSIPVTHHKLLSPIKNPGFVPSNNAAYIMEAAARIIEPGSSQAKAKTHMAASSTVSLRVKDVRDKLDSSQKVPLITTSSVAFRTRELKEKRDISQRTSRVSERSQRSSVESNAAKYLKGQSLNRSWNGTPETSVKSPTNAEEDFSLKNKGKSVLSAETSAKSPTHAEEDFSLKNKGKSVSSAETSVKSPTHAEEDSTLKNKGKSVSLAIQAKVNVQRREGLSSTGGRNLMGQKEHVDIKSNQPLPKANAQKNLHRKSSGQNSSNVLRQNNLKQNHSNDNNDRLAPSKPLVSNSQGRKVTTGDSPYGRHRSSSSKSTAKSKVGSRKSAVEVTDSENEILYTSTNNFPRKKRTTDKDWNDRVVDNLFIDKTPKSVKSNLSSNKQYGWSEEVKKKDMDVVSFTFTTPLTRSSSNPGSETPRQDGKNTNELSLDQRIKRVLLDADNTRSPIGYNVIGGDALGILLEQKLKELSQLTSGVETSSITAPKSNDQVTNFNIVNLNPRSEQKKDQDMSFTESLSGSRGSDMSFTNLPESSLKHKSWGDEMEPLSFNCRQPSPISVLEPSFSIESCESSISADVTSTEGSKMFSSLQAQEIHGFNFSRKFYPTECDAELSDSASSTSTRTMMKKQNSTFSVMKFGRSSSTWELDYVKEILCNVELMYIDFSLGRSHEVVNSHLFNQLESRKGGFKSDDESRIERKVIFDCVSECLDLRCKSYVGGGYKMWIKGFEIVKRKDWLAKDVYKEILGWKGMRDSMVDELVDKDMSSQYGKWLELDYEVDAYEFGEEVADQIFNSLVDDVVYDMLQF* 974
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2843 973 MobiDBLite consensus disorder prediction 259 371 - -
Tpr5g2843 973 MobiDBLite consensus disorder prediction 387 501 - -
Tpr5g2843 973 MobiDBLite consensus disorder prediction 573 594 - -
Tpr5g2843 973 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 1 240 - -
Tpr5g2843 973 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 331 971 - -
Tpr5g2843 973 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 238 352 - -
Tpr5g2843 973 MobiDBLite consensus disorder prediction 670 693 - -
Tpr5g2843 973 MobiDBLite consensus disorder prediction 270 311 - -
Tpr5g2843 973 PANTHER EXPRESSED PROTEIN 331 971 - -
Tpr5g2843 973 PANTHER EXPRESSED PROTEIN 1 240 - -
Tpr5g2843 973 PANTHER EXPRESSED PROTEIN 238 352 - -
Tpr5g2843 973 Pfam DUF761-associated sequence motif 78 109 IPR032795 -
Tpr5g2843 973 MobiDBLite consensus disorder prediction 573 597 - -
Tpr5g2843 973 MobiDBLite consensus disorder prediction 413 494 - -
Tpr5g2843 973 Pfam Domain of unknown function (DUF4378) 813 965 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2843 Tpr-Chr5 51607585 51612168 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2843 373 971 TRM (TON1 Recruiting Motif) Superfamily AT3G58650 30.016 2.27e-49 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2843 - - gmx:102669513 1261.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2843 5 51607585 51612168 Tpr5g2843 5 51607585 51612168 ECH