Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2831 ATGATTGAGTCGACTCTTTTTACTTGGGTTGAGCATGTGGAAGTAGAAGATATGCTTCATACACACCAAATCTTTAAAGATTTTGTTCGTAACTATAATTTATATGGAGCTGAAAGTTGGATTAAGGAGCTTCAAAGAATGTGCGAGAGATCTTCTAGTTTTTATGCTGAAACTATACCCACTGAAGAATCTATAGGAGTGATCCAAACAATTGAATGGAGGAGGAGTGTGATGAAGTTTGCTCATAGAATGGTTAAGATTTTCTATGAATGTTTAACAAAGGTTGGTCAATTAGAATTCCAAAATTTGAATCTTGGTAATAGCATTGGTGGGGTTAGAGTCTCTCTTCACCAAGCCAGCATAGGCCACCCAAATGGCATAATTGTTGTTGCTGCTACCACCCTTTGGCTCCCTCTGCCTGCTGAATATGTTTTTGAATTCCTCAAAGACCCTATGAAAAGATATCAGTGGGATGTTATGGCTTATGCAAACCTAATGTATGAGATCGACCACATTTCAAATGGACTCTATCCTGCTTCCATTTTTCAGTCATATTGGGTGAAGAGTGAAGACTCGAAAAACCTACACATTCTTTCAACTGGATTTGGAGTGTGTTCAAGTGAACAACCAAATGCAAATTTTGAAGCATTTAATAGTATTGGAAGTAGCAGTGGTGGTGGTGTTGGAAGAGGAGGAGCTGACACATTGTTAACTTTGGCCTACCAAATTTTGACATGTAGCCCAAATGGAATTGATCAGCACCAAAACATGAAAGCTTTTGCTACTTTCAACACCCTTCTGTCTACTAGTGTTCTAAAAGTAAAGAATGCTCTCATGAACTCTACTTAA 849 0.3816 MIESTLFTWVEHVEVEDMLHTHQIFKDFVRNYNLYGAESWIKELQRMCERSSSFYAETIPTEESIGVIQTIEWRRSVMKFAHRMVKIFYECLTKVGQLEFQNLNLGNSIGGVRVSLHQASIGHPNGIIVVAATTLWLPLPAEYVFEFLKDPMKRYQWDVMAYANLMYEIDHISNGLYPASIFQSYWVKSEDSKNLHILSTGFGVCSSEQPNANFEAFNSIGSSSGGGVGRGGADTLLTLAYQILTCSPNGIDQHQNMKAFATFNTLLSTSVLKVKNALMNST* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2831 282 SUPERFAMILY Bet v1-like 110 177 - -
Tpr5g2831 282 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG10-RELATED 7 175 - -
Tpr5g2831 282 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG10-RELATED 187 280 - -
Tpr5g2831 282 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 7 175 IPR042160 -
Tpr5g2831 282 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 187 280 IPR042160 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2831 Tpr-Chr5 51421935 51424956 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2831 8 278 Homeobox Transcription Factor Family AT1G17920 32.484 9.56e-41 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2831 K09338 - gmx:100795075 228.024