Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2816 ATGTTTGTTTTTGCATATTCCATTTGCAGTGAAATTCCAAAAACACTACAATTCTCAAAACCCACAAATATCAAAACTTTCTCTTCAATTCAACCACCCCACTATTTCTCTTCCACTTCCATAAGATTTTCCATCAGAACTCGAGTTCCTTTCTCTGCAAGGATATTCTTATGTCATGCAAAATCTGGCACGAATGAGTCTTTAAACATACAAGTGTTATCTCCAACCCTATTAGAAGACCCTCATATTGTTTATCTTATGGAACATGGAATGACTATTGATCAGGTTAGGACTATCATGCGACGATTCCCGGCTTTCTCCCGCTATAGTTTGGAGGGTAAAATTAAGCCATTGGTTGAGTTTTTTCTTGAATTTGGAGTGCCGAAAGAACAAATTCTTATTATCCTCACTAAAAGACCTCGATTATGTGCACTCAGTCTATCTAAAAATATTAAGCCCACCGTGAAATTCCTCGAATCTTTGGGCGTCGACAAAAAACAATGGGCGAAGGCGATATACCGCTTCCCTGCCTTGCTAACTTATAGCAGGCAGAAAATTAATGAAAGTGTAGATTTTCTCCATGAATTAGGCATCTCAGACGAGAGCATAGGTAGGATTTTAACTCGTTTCCCTAATATCGTTGGTTGCAGTGTAGAGGACAATCTCCGACCAACAGCAACGTACTTCCGTTCATTAGGGGTTGATGTTGGCGCTCTTCTGTTGAGGTGTCCGCAAATTATTGGCCTTAGCATTGAGGCGAATATAAAGCCTGTAACCGAATTTTTCTTGGAAAAGGGATATACCTTGGAAGAAATTGGGACTATGATTTCGAGATGTGCAATGTTGTACGCTTACAGCTTGACTGAGACTATGGTCCCAAAATGGGATTATTTTATGACTATGGATTACCCGAAATCCGAGCTGGTTAAATTCCCTTATTATTTTGGATACAGTTTAGAACAAAGGATTAAACCGAGATATGCACGCATGAAAAGTTCTGGGAGGAGATTAGCGTTGAATCGGCTTCTTTCACCGTCAAGCAGCAACTTTGAAAAGGTCTTAAAAATGAAAAATAAAGGAATTGCAGGTTGA 1092 0.3929 MFVFAYSICSEIPKTLQFSKPTNIKTFSSIQPPHYFSSTSIRFSIRTRVPFSARIFLCHAKSGTNESLNIQVLSPTLLEDPHIVYLMEHGMTIDQVRTIMRRFPAFSRYSLEGKIKPLVEFFLEFGVPKEQILIILTKRPRLCALSLSKNIKPTVKFLESLGVDKKQWAKAIYRFPALLTYSRQKINESVDFLHELGISDESIGRILTRFPNIVGCSVEDNLRPTATYFRSLGVDVGALLLRCPQIIGLSIEANIKPVTEFFLEKGYTLEEIGTMISRCAMLYAYSLTETMVPKWDYFMTMDYPKSELVKFPYYFGYSLEQRIKPRYARMKSSGRRLALNRLLSPSSSNFEKVLKMKNKGIAG* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2816 363 SMART mt_12 133 164 IPR003690 GO:0003690|GO:0006355
Tpr5g2816 363 SMART mt_12 305 336 IPR003690 GO:0003690|GO:0006355
Tpr5g2816 363 SMART mt_12 169 199 IPR003690 GO:0003690|GO:0006355
Tpr5g2816 363 SMART mt_12 97 128 IPR003690 GO:0003690|GO:0006355
Tpr5g2816 363 SMART mt_12 273 304 IPR003690 GO:0003690|GO:0006355
Tpr5g2816 363 SMART mt_12 204 235 IPR003690 GO:0003690|GO:0006355
Tpr5g2816 363 SMART mt_12 237 268 IPR003690 GO:0003690|GO:0006355
Tpr5g2816 363 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF5, CHLOROPLASTIC 74 359 - -
Tpr5g2816 363 PANTHER CGI-12 PROTEIN-RELATED 74 359 IPR003690 GO:0003690|GO:0006355
Tpr5g2816 363 Pfam mTERF 238 351 IPR003690 GO:0003690|GO:0006355
Tpr5g2816 363 Pfam mTERF 87 265 IPR003690 GO:0003690|GO:0006355
Tpr5g2816 363 Gene3D Transcription termination factor 3, mitochondrial 138 358 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2816 Tpr-Chr5 51190077 51192962 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Tpr5g2816 mTERF 6.5e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2816 K15032 - gmx:100781900 416.772