Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2802 ATGACGTCTCGTCCGTCGCCCGGCGTCAAAAGCAGCAACGGCGGACGGCCTAGAGCTGGTAAGTATGAGCTTGGTAGGACGCTTGGCGAAGGAAATTTTGCGAAGGTGAAGTTTGCTAGACATGTTGAAACTGGAGAACATGTAGCTATCAAAATTCTTGATAAGGAAAAAATTCTCAAGCACAAAATGATTCGTCAGATAAAGCAAGAAATATCAACAATGAAACTGATTAGACACCCAAATGTCATACGCATGCATGAGGTAATAGCGAACAGGTCAAAGATATTCATTGTAATGGAAATTGTGACTGGTGGGGAGCTGTTTGATAAAATTGCACGCAATGGGAGGTTGAAAGAAGATGAAGCAAGAAAATACTTTCAGCAGCTTATATGTGCTGTGGATTACTGTCATAGTAGAGGTGTTTGCCACAGAGACCTAAAGCCTGAGAATTTGTTGCTGGATGCTAACGGAGTTCTTAAAGTATCGGATTTTGGATTGAGTGCATTGCCTCAACAAGTTCGGGAAGATGGGCTACTTCACACAACATGTGGTACTCCAAATTATGTTGCTCCAGAGGTGATCCAAAACAAAGGGTATGATGGTGCAATTGCAGATCTCTGGTCATGTGGTGTTATTCTTTTCGTTTTAATGGCTGGCTATTTGCCCTTTGAAGAAGACAATCTTGTGGCTTTATATAAAAAGATTTTCAAGGCTGAGTTCACATGTCCTCCCTGGTTCTCTTCAAGTGCAAAGAAACTAATCAAAAGAATCCTTGATCCCAGTCCTGTCACACGGATTAAAATTGCCGATGTCATTGAAAATGAGTGGTTCAAGAAGGGATATACGCCTCCTGTGTTTGAACAGGCCGATGTTAGTCTTGATGATGTAAACTCTATTTTCGGCGGTTCTATGGATTCAGATAGTATTGTTTTTGAGAAGCAAGAAGAAGGGCCTGTTGCACCTGTGACAATGAATGCGTTTGAACTTATCTCTAAGTCTCGGGGCCTCAACCTTGGTAGCCTTTTTGAGAAGCAAATGGGACTTGTTAAAAGGGAAACAAGATTCACATCCAAATGTTCAGCGAATGAGATAATTGCAAAAATCGAGGAAACTGCTGGACCTCTGGGTTTTGACGTAAGGAAGAACAACTGCAAGTTAAGGATTCATGGGGAAAAATCTGGACGGAAAGGTCATCTATCTGTAGCCACGGAGATCTTGGAGGTGGCCCCTTCAGTTTACATGGTTGAGATGCGAAAATCTGAAGGAGATACTCTGGAATTTCACAAGTTCTACAAAAATATATCTACTGGGCTGAAAGATATTGTTTGGAAAGCAGATCCTATTGCTGAAGAAAGTGATGATGGTGCCAGTACCTCCTCAAAATAA 1386 0.417 MTSRPSPGVKSSNGGRPRAGKYELGRTLGEGNFAKVKFARHVETGEHVAIKILDKEKILKHKMIRQIKQEISTMKLIRHPNVIRMHEVIANRSKIFIVMEIVTGGELFDKIARNGRLKEDEARKYFQQLICAVDYCHSRGVCHRDLKPENLLLDANGVLKVSDFGLSALPQQVREDGLLHTTCGTPNYVAPEVIQNKGYDGAIADLWSCGVILFVLMAGYLPFEEDNLVALYKKIFKAEFTCPPWFSSSAKKLIKRILDPSPVTRIKIADVIENEWFKKGYTPPVFEQADVSLDDVNSIFGGSMDSDSIVFEKQEEGPVAPVTMNAFELISKSRGLNLGSLFEKQMGLVKRETRFTSKCSANEIIAKIEETAGPLGFDVRKNNCKLRIHGEKSGRKGHLSVATEILEVAPSVYMVEMRKSEGDTLEFHKFYKNISTGLKDIVWKADPIAEESDDGASTSSK* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2802 461 SMART serkin_6 22 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g2802 461 Gene3D Phosphorylase Kinase; domain 1 11 101 - -
Tpr5g2802 461 ProSitePatterns Protein kinases ATP-binding region signature. 28 51 IPR017441 GO:0005524
Tpr5g2802 461 MobiDBLite consensus disorder prediction 1 22 - -
Tpr5g2802 461 CDD CIPK_C 325 440 - -
Tpr5g2802 461 ProSiteProfiles Protein kinase domain profile. 22 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g2802 461 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 16 449 - -
Tpr5g2802 461 Gene3D Transferase(Phosphotransferase) domain 1 102 283 - -
Tpr5g2802 461 CDD STKc_SnRK3 21 276 - -
Tpr5g2802 461 Pfam NAF domain 321 381 IPR004041 GO:0007165
Tpr5g2802 461 Gene3D Kinase associated domain 1, KA1 319 444 - -
Tpr5g2802 461 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
Tpr5g2802 461 SUPERFAMILY Protein kinase-like (PK-like) 19 292 IPR011009 -
Tpr5g2802 461 Pfam Protein kinase domain 22 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g2802 461 ProSiteProfiles NAF domain profile. 319 343 IPR018451 GO:0007165
Tpr5g2802 461 PANTHER SERINE/THREONINE KINASE 16 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2802 Tpr-Chr5 50797222 50803688 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2802 10 451 CBL-interacting serine-threonine protein kinases AT1G01140 67.411 0.0 641
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Tpr5g2802 Pkinase 7.1e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2802 - - gmx:100788746 776.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2802 5 50797222 50803688 Tpr5g1512 5 28823828 28828526 PCT