Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2783 ATGCAAATCAATACCCAAACCATAACAACCGATTTTCATAACACTCGAGTAAGGGTCTTACCCGAATATGATGTCTTTATTCATACTTCTGATGGCACACGCATTCCAGCTCACACAAGCATCCTGGCCTCGGTGTCACCGGTTTTCGAGAATATTCTAGAACAACCGCGTAAACAACGAAGCTCCGAAAGAATAATCAAAATCAACGGCGTTCCTTCCACCGCCGTAACTGCCTTCATCAGCTTCCTTTACTCATCCAGGTGTACGGAGGATGAAATGGACAAATATGGAATCCACCTGCTTGCACTATCACACGTGTACAACGTGCCACAACTGAAACAGAAATGCATCAAAGGCCTTGTTCAACGGTTAACCGTAGAAAACGTGGTGGATGTACTCCAACTCGCGAGACTCTGCGACGCGCCGGATCTCCGTCTCCGTTGTATGAAACTACTTGCCAATCACTTCAACGCGGTGCAAAAATCTGAAGGGTGGAAGTTTCTCACCAAACATGATCCCTGGCTTGAACTAGATATCCTTCACTTCATGGACGAAAGTGAAACGAGGAGAGAGAAATTGAGGAGGCATAGGGAGGAGCAGGGGCTATATGCGGAACTGAGTGAAGCAATGGAATGTTTGGAGCATATATGTACGGAAGGTTGCACTGATGTTGGGCCGTATCATGTGGAGGTTGATAGAGAAAGGAAGCCTTGTAGCAAATTCTCAACTTGTCAAGGTCTTCAGCTTCTGATTCGCCATTTTGCGACGTGCAAGAGGCGGGTGAAGGGAGGTTGTTGGCGGTGCAAGCGTATGTGGCAGCTGTTTAGATTGCATTCATATGTTTGTCAACAAATTGATGATTCTTGCAATGTTCCTCTTTGCAGACAATTTCAATTGAAAATGGAGCAAGAGAAAAGGAAAGATGATCCCAAGTGGAAACTACTTGCAAGAAAGGTGGCCTCAGCTAAAGTCATGTTTTCATTGTCTCTTCCTAAGAGAAAGAGGGATGAAGAAATGAGAGTGACCATAGATAATCGTGGGATAAGATGTTTTGGTTACAATAAATATTGTAACAATGTACAAGACAATAGATGCATTTCATGTTGA 1107 0.4408 MQINTQTITTDFHNTRVRVLPEYDVFIHTSDGTRIPAHTSILASVSPVFENILEQPRKQRSSERIIKINGVPSTAVTAFISFLYSSRCTEDEMDKYGIHLLALSHVYNVPQLKQKCIKGLVQRLTVENVVDVLQLARLCDAPDLRLRCMKLLANHFNAVQKSEGWKFLTKHDPWLELDILHFMDESETRREKLRRHREEQGLYAELSEAMECLEHICTEGCTDVGPYHVEVDRERKPCSKFSTCQGLQLLIRHFATCKRRVKGGCWRCKRMWQLFRLHSYVCQQIDDSCNVPLCRQFQLKMEQEKRKDDPKWKLLARKVASAKVMFSLSLPKRKRDEEMRVTIDNRGIRCFGYNKYCNNVQDNRCISC* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2783 368 Pfam BTB/POZ domain 24 122 IPR000210 GO:0005515
Tpr5g2783 368 CDD BACK 125 172 - -
Tpr5g2783 368 SUPERFAMILY TAZ domain 198 298 IPR035898 -
Tpr5g2783 368 SMART BTB_4 23 124 IPR000210 GO:0005515
Tpr5g2783 368 ProSiteProfiles BTB domain profile. 23 92 IPR000210 GO:0005515
Tpr5g2783 368 Gene3D TAZ domain 198 323 IPR035898 -
Tpr5g2783 368 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 6 352 IPR044513 -
Tpr5g2783 368 Gene3D - 125 197 - -
Tpr5g2783 368 SUPERFAMILY POZ domain 23 123 IPR011333 -
Tpr5g2783 368 Gene3D Potassium Channel Kv1.1; Chain A 21 124 IPR011333 -
Tpr5g2783 368 SMART TAZ_2 200 295 IPR000197 -
Tpr5g2783 368 Pfam TAZ zinc finger 207 294 IPR000197 -
Tpr5g2783 368 PANTHER BTB/POZ AND TAZ DOMAIN PROTEIN 6 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2783 Tpr-Chr5 49947211 49950683 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Tpr5g2783 BTB 1.3e-15 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2783 - - cam:101496955 672.159