Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2781 ATGGGAAATCAAGAGAAAGGGAAAGGGCTGATGGAACCTGAAAATTCTGCAGAGAAATTAACAGCGCTGGTTGTAGATGACGATAAGCTTGTCCGAATGATTCATCAAGGTCTGTTGAAAAGAGCTGGTGTGAAAAATGAAGCTGTGAAAAATGGTAAAGAAGCTGTAGATATTCATTACAGTGGTCAAAGATTTGACATTATTCTCATGGATAACGAAATGCCTATCATGACTGGGATTGAGGCAACCAAGAAACTGCGATCAATGGGCATACTTAGCAGGATTATTGGTGTGTCGTCGTGTACAGAAGCAGAAAAACAGGAATTTATGAAAGCTGGGATAGATGACTATCAAGTGAAACCATTGACCATTGGTGTGCTTAATTCGATTCTTGATGTTGTAAAAGCTAGCAAGTAG 417 0.3957 MGNQEKGKGLMEPENSAEKLTALVVDDDKLVRMIHQGLLKRAGVKNEAVKNGKEAVDIHYSGQRFDIILMDNEMPIMTGIEATKKLRSMGILSRIIGVSSCTEAEKQEFMKAGIDDYQVKPLTIGVLNSILDVVKASK* 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2781 138 CDD REC_hyHK_CKI1_RcsC-like 23 131 - -
Tpr5g2781 138 PANTHER TWO-COMPONENT RESPONSE REGULATOR 10 136 - -
Tpr5g2781 138 ProSiteProfiles Response regulatory domain profile. 21 135 IPR001789 GO:0000160
Tpr5g2781 138 SMART REC_2 20 131 IPR001789 GO:0000160
Tpr5g2781 138 Pfam Response regulator receiver domain 23 129 IPR001789 GO:0000160
Tpr5g2781 138 SUPERFAMILY CheY-like 19 134 IPR011006 -
Tpr5g2781 138 Gene3D - 3 137 - -
Tpr5g2781 138 PANTHER TWO-COMPONENT RESPONSE REGULATOR 24 10 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2781 Tpr-Chr5 49934235 49934728 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2781 2 123 Response Regulator Gene Family AT3G04280 43.200 2.07e-25 92.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Tpr5g2781 Response_reg 1.4e-19 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2781 - - cam:101506170 189.504