Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2767 ATGTCACATAACCTTTATTATACTACTAGTACCTTCAAAGGTGAAGTAGAATACAACAATGATGAAAATCCATTAATGGGTTGTTATGCATCTTTATATCCTAATATGCCTATTTTGGAAAACAGTTCTAATTCATCATCATGGATTGTTCCATATTCTGATGAAAGTGAAACCATTAGGGATCATAAGAAATTGAAAAGATCAACTATAACTATCCCTATTTTGTTTGCAAATATCAGCAACCATAACTCAACCAGCATCAATACTTTCTTCAAAAACAGTAACAAAAGTAGTGTGAATAGCATACCAAGGCTTCATTTCAGAGATCATATAAGAACTTATAAGCAAAGATATTTTGCTGCTGAAGCTGTTGAAGAAGCAGCAGAAGAACATTTCAATTATAATAATTCTGAAGCTGAAGAAGAAGATGGTACATGTGCTGATGGAATGAGATTAGTTCAACTTTTGATTGCTTGTGCTGAAGCTGTAGCGTGTCGCGACAAATCACATGCTTCGGTTTTATTATCTGAACTTAAATCAAATGCTTTGGTGTTTGGTTCATCATTCCAAAGAGTTGCTTCTTGTTTTGTTCAAGGATTGACTGAGAGACTAACTCTGATTCAACCAATTGGAAATAATTCTGTTGGATCAGATACAAAATCAATGATGAACATAATGGATGCTGCATCAGAAGAAATGGAAGAAGCATTCAAATTGGTTTACGAGATATGTCCACATCTTCAATTTGGACATTTTGTGGCTAATTCCATAATATTGGAAGCCTTTGAGGGTGAGAGTTTTGTTCATGTGGTTGACTTAGGCATGAGTCTAGGTCTACCACATGGACACCAATGGCGAGGACTAATTCAAAGTCTCGCAAATCGATCTGGTAGTCAACGTGTTCTTCGTCGGCTTAGGATCACAGCGGTTGGTCTATGCATTGCTAGAATCCAAGTCATTGGTAAAGAACTCTCAATTTACGCAAAAAATTTAGGGGTTCATTTGGAATTCTCGATTGTCGAGAAAAATTTGGAGAATTTGAAACCTGAAGACATAAAAGTGAATGAAAAAGAGGTTCTTGTGGTTAACAGCATTCTTCAATTGCATTGTGTTGTTAAGGAAAGTCGCGGTGCTTTGAATTCGGTTTTACAAATGGTACACGGTCTTTCGCCGAAAGTTTTGGTGATGGTTGAACAAGATTCAGGTCACAATGGACCTTTCTTTCTTGGAAGGTTTATGGAATCATTGCATTACTATTCTGCTATTTTTGACTCTTTGGATGCTATGCTACCAAAGTATGATACTAAGAGAGCAAAAATTGAACAGTTTTATTTTGCTGAGGAGATAAAGAACATTGTGAGCTGTGAAGGACCATTGAGGATGGAAAGGCATGAGAAAGTTGATCAATGGAGGAGGAGAATGAGTAGGGCTGGATTTCAAGGCGCGCCGATTAAGATGGTGGTTCAAGCTAAGCAGTGGCTTTTGAAGAATAAGATTTGTGATGGATATACTGTTGTGGAAGAGAAAGGTTGCTTGGTTCTTGGATGGAAATCAAAGCCAATTGTTGCAGTTTCTTGCTGGAAATGCTGA 1590 0.3711 MSHNLYYTTSTFKGEVEYNNDENPLMGCYASLYPNMPILENSSNSSSWIVPYSDESETIRDHKKLKRSTITIPILFANISNHNSTSINTFFKNSNKSSVNSIPRLHFRDHIRTYKQRYFAAEAVEEAAEEHFNYNNSEAEEEDGTCADGMRLVQLLIACAEAVACRDKSHASVLLSELKSNALVFGSSFQRVASCFVQGLTERLTLIQPIGNNSVGSDTKSMMNIMDAASEEMEEAFKLVYEICPHLQFGHFVANSIILEAFEGESFVHVVDLGMSLGLPHGHQWRGLIQSLANRSGSQRVLRRLRITAVGLCIARIQVIGKELSIYAKNLGVHLEFSIVEKNLENLKPEDIKVNEKEVLVVNSILQLHCVVKESRGALNSVLQMVHGLSPKVLVMVEQDSGHNGPFFLGRFMESLHYYSAIFDSLDAMLPKYDTKRAKIEQFYFAEEIKNIVSCEGPLRMERHEKVDQWRRRMSRAGFQGAPIKMVVQAKQWLLKNKICDGYTVVEEKGCLVLGWKSKPIVAVSCWKC* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2767 529 ProSiteProfiles GRAS family profile. 143 528 IPR005202 -
Tpr5g2767 529 PANTHER DELLA PROTEIN RGL1-LIKE 90 528 - -
Tpr5g2767 529 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 90 528 IPR005202 -
Tpr5g2767 529 Pfam GRAS domain family 152 528 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2767 Tpr-Chr5 49819840 49821683 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2767 149 528 GRAS Transcription Factor Family AT1G66350 37.240 1.25e-75 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Tpr5g2767 GRAS 1.1e-109 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2767 - - gmx:100813548 740.725
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2767 5 49819840 49821683 Tpr5g2767 5 49819840 49821683 ECH