Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2761 ATGGCGGCAGGAAGACAAAGTGTTTTAGGGAAGAGAGAGTCTTACAAATATGATTCTGTCAAGGAATTTGATTACCATAAGAAAGGTTCTTATGGAAAAGATGATAGAGAAGAAGGTGAAATTATTGTTGATGGGGATGACGCTTTTTCACCACCAGAAAAGAGAAGAAAATTCTCTCCTATTTTATGGGATATGGCTGAGAAGAAGGCGAAAGTTTCTTCCAAAGACAAAGTCACTGAGTCTCTAACTCGATCATCTGTGAGTCCTGGAGGCAACGGGTCGTCGATGAATTCCTCTTGTGTGGATGAAGAAAGTGATATGCAGGAATGGAATATCACAAAGTCAAAGTGGGCTTCTGATGATCTTTCACCGATCGGTGATGATGTTAAATACAAGCAACACAAAAGAGGCTCCAGTTCAGAAGTTGGTGGTAGTTCAGATAGCACAATTACTAGATCTGATGTTGATGAAGAGGGTAGTGTTTCTCCATCAGATACTTTTGAAAATAGTGGTGTGATGAACATGCAGAGAAATTTTAACATGTGTCAGAGTTGCAGAAGTGTGTCTGAGTTTGAAATGATTAAGAAAATTAATGAAGGAACTTATGGTGTTGTCTATAAAGCTAAGGATAAGAAGACTGGAGAAATTGTAGCACTAAAGAAGGTGAAGATGGAAATGGAGAGGGATGGATTTCCAATGACAGCCCTTAGAGAAATGAATATTCTCTTGTCTTTAGACCATCCCTCTATTGTGGATGTTAAAGAAGTAGTCGTGGATGATGACGATTGCGATGATGGTACTTATATGGTTATGGAACATATGCAATACGATCTCAAACAATTGATGGAGGCAAAGACCCAACCTTTTAGTATGGGCGAAATTAAATCCTTCATGAAGCAACTTCTTGAAGGAGTCAAGTATCTCCACGATAACTGGATTCTCCATAGGGATTTGAAGACATCTAACATTCTGCTGAATAAAGATGGACATCTGAAAATATGCGACTTCGGAATGTCAAGGCAGTATGGTAGCCCTCTGAAGCAATATACTTCACTTGTGGTTACACTATGGTACAGAGCACCTGAACTTTTGTTGGGCGCTAAAAAATACTCCAAAGCAATTGATATGTGGTCGGTGGGTTGTATAATGGCTGAATTACTTTCAAAGGAGCCACTTTTCAAGGGTAAAACGGAAATCGAACAAATTGACAAGATTTTTCGAACCCTTGGTACACCAGATGAGAAAATATGGCCAGGATTATCCAAATTGCCGGGGTCTAAAGCAAATTTTGTTAAGCAACGGTGTAGTATGCTAAGGATGAAGTTTCCAGCTGCATCTTTCACTGGGATGCCAGTTTTATCCGAGTCGGGGTTTGACTTGTTGAATAAGCTTCTAGCTTATGATCCTGAAAAGAGGATATCTGCTGAAGCTGCTCTGCAACATGATTGGTTTCGTGAAGGTCCACTTCCCCGATCTGATTTCAATCCAATTTTTTCCTCGTGGTAG 1506 0.3991 MAAGRQSVLGKRESYKYDSVKEFDYHKKGSYGKDDREEGEIIVDGDDAFSPPEKRRKFSPILWDMAEKKAKVSSKDKVTESLTRSSVSPGGNGSSMNSSCVDEESDMQEWNITKSKWASDDLSPIGDDVKYKQHKRGSSSEVGGSSDSTITRSDVDEEGSVSPSDTFENSGVMNMQRNFNMCQSCRSVSEFEMIKKINEGTYGVVYKAKDKKTGEIVALKKVKMEMERDGFPMTALREMNILLSLDHPSIVDVKEVVVDDDDCDDGTYMVMEHMQYDLKQLMEAKTQPFSMGEIKSFMKQLLEGVKYLHDNWILHRDLKTSNILLNKDGHLKICDFGMSRQYGSPLKQYTSLVVTLWYRAPELLLGAKKYSKAIDMWSVGCIMAELLSKEPLFKGKTEIEQIDKIFRTLGTPDEKIWPGLSKLPGSKANFVKQRCSMLRMKFPAASFTGMPVLSESGFDLLNKLLAYDPEKRISAEAALQHDWFREGPLPRSDFNPIFSSW* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2761 501 MobiDBLite consensus disorder prediction 29 48 - -
Tpr5g2761 501 MobiDBLite consensus disorder prediction 130 170 - -
Tpr5g2761 501 Gene3D Phosphorylase Kinase; domain 1 173 275 - -
Tpr5g2761 501 Pfam Protein kinase domain 191 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g2761 501 PANTHER CYCLIN-DEPENDENT KINASE 158 501 - -
Tpr5g2761 501 ProSiteProfiles Protein kinase domain profile. 191 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g2761 501 SUPERFAMILY Protein kinase-like (PK-like) 183 489 IPR011009 -
Tpr5g2761 501 MobiDBLite consensus disorder prediction 138 170 - -
Tpr5g2761 501 MobiDBLite consensus disorder prediction 68 105 - -
Tpr5g2761 501 ProSitePatterns Serine/Threonine protein kinases active-site signature. 313 325 IPR008271 GO:0004672|GO:0006468
Tpr5g2761 501 CDD STKc_CDC2L1 185 484 IPR045267 GO:0004674|GO:0005524|GO:0006468
Tpr5g2761 501 MobiDBLite consensus disorder prediction 79 105 - -
Tpr5g2761 501 SMART serkin_6 191 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr5g2761 501 Gene3D Transferase(Phosphotransferase) domain 1 276 491 - -
Tpr5g2761 501 PANTHER CELL DIVISION PROTEIN KINASE 158 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2761 Tpr-Chr5 49729047 49731728 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2761 186 490 Core Cell Cycle Gene Families AT5G10270 47.484 1.08e-92 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Tpr5g2761 Pkinase 4.1e-78 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2761 K08818 - gmx:100788840 628.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2761 5 49729047 49731728 Tpr5g2761 5 49729047 49731728 ECH