Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2749 ATGGCCGCCACAACCACCACCAGCCTAGGCGGACCTACTGGCGGCGGAGACGATCGAGTTCTCGCAACAGCACAACAGATCTTAAAAAGCCTTAAAGCTCCAAAAGAAGATCGTGAAGACATGCTTTTAATCTTCTCCACCTTCGATAATCGTCTCTCCGGTATCACTGACCTAATCAACGGCGACGATTCAAAATCCTCCGATGATGCCGATGTTGATGACGAAGACCTTGACCGTTTCGACGCCGCTGAGAAAGTCATACTCGTTGACGCTTCAATCTACACCGAACCGTCGCGTCAATCGACTTCGCTTTTCGATCCTCCGAATGATCCGGTTGAGTATTTCACCGCTGTTGATGAGATTATTCAGTGGATGGAACACTTTACGATTGCGCCGCCGCATCAATCGGCGGGGAAAACCGGTCAGATCATTTTGGACCGTGCTGAGAACGCGATCCAGCTTGCTATGTCGAGACTTGAAGATGAGCTTCGTCATGTGTTGATTTGTAACACCGTTCCGCCGGATTCTGTTAGCCGGTGTAGTACTAATCGGAGGAATTCGTTATCTTTCAGTGTGCACGACGGTGTGATTGATGATAATTCTAGTAGCTTTGGTGATGTAAGTGATCCTGGTTCTCATCGGTTTCATGAACGTGGTGTTAGTCTTGGAGATGATTTGTTTGTTGATTTGGTTCGGCCGGAATCGATTATGAATCTGAAAGATATTATTGATCGTATGGTTAGGTCTGGTTATGAGAGGGAGTGTCTTCAGGTTTATAGTAGTGTTCGTCGTGACGCTTTGGTTGAGTGTTTGGCGATTCTTGGTGTTGAGAAAATGAGTATTGAAGAGGTTCAGAAGGTTGAGTGGAAGAGTTTGGATGAGAAAATGAAGAATTGGGTACAAGCTGTTAAGGCTGTTTTTGGGGTTTTGTTGAGTGGGGAAAAGAGGCTTTGTGATAGTCTTTTTGGTGATTTGGATGATTTGAAGGAGATTTGTTTCAATGAAACTGCTAAAGGATGTGTTATGATGTTGTTGAATTTTGGTGAAGCTGTTGCAATTTGTAAGCGGTCACCGGAGAAGTTGTTTAGGATATTGGATATGTATGAGGCTTTGAGAGATCGTTTGCCTGATTTGGAGGACATGGTTACGGATGAATTTGTGATCACAGAGGCAAAGGGTGTGCTTAGAGGGCTTGGTGAGGCTACAAAAGGGACATTTTCTGAATTTGAGAGTTGCATTCGGAATGAGACTTCCAGAAAACCGGTTCTAACAGGGGATGTTCATCCTTTGCTTAGGTATGTTATGAATTACCTGAAACTGCTTGTGGATTATGGCGATGCCATGGATTCGCTTTTGCAAATCAGTGAAGAGGCTCTTTACCGGTTTGAAAATGATTTGGGTGGTGATGGTTCCCAGTTAGAGGCCTTGTCCCCTTTAGGACGACAAATACTGCTGTTGATGTCTGAACTTGAATACAATCTTGACGAAAAATCAAAACTTTATGAAGACAGTGCATTGCAGCAGGTGTTTTTGATGAACAATCTTCATTATCTAGTGCGCAAAGTGAAGGACTCGGATCTTAGAGGTCTGTTGGGAGATGATTGGGTTCGTAAACGCCGTGGTCAAGTACGACAGTATGCTACGGCATACCTCAGAGCCTCTTGGAGCAAGGCCTTGTCTTGTTTGAAGGATGAAGGTATTGGAAGCAGCTCTAATAATGCATCAAGGGTGGCTTTGAAGGAGAGGTTCAAGAATTTCAATGCATGTTTTGAAGAAATATACAGGGCTCAGACAGCTTGGAAGGTACCTGATGATCAGCTTCGTGAAGAGATGCGGATAAATATATCAGAGAAGGTGATTCCTGCATACCGCTCATTTATGGGGAGATTTAGCGGGCAACTGGAGGGAAGACATGCAGGCAAATACATTAAGTATATACCAGAGGATCTAGAGACTTATTTATTAGATTTATTTGAAGGATCCCCTGCTGTATTGCATCACATAAAGAGAAAGAGTTAG 2019 0.4393 MAATTTTSLGGPTGGGDDRVLATAQQILKSLKAPKEDREDMLLIFSTFDNRLSGITDLINGDDSKSSDDADVDDEDLDRFDAAEKVILVDASIYTEPSRQSTSLFDPPNDPVEYFTAVDEIIQWMEHFTIAPPHQSAGKTGQIILDRAENAIQLAMSRLEDELRHVLICNTVPPDSVSRCSTNRRNSLSFSVHDGVIDDNSSSFGDVSDPGSHRFHERGVSLGDDLFVDLVRPESIMNLKDIIDRMVRSGYERECLQVYSSVRRDALVECLAILGVEKMSIEEVQKVEWKSLDEKMKNWVQAVKAVFGVLLSGEKRLCDSLFGDLDDLKEICFNETAKGCVMMLLNFGEAVAICKRSPEKLFRILDMYEALRDRLPDLEDMVTDEFVITEAKGVLRGLGEATKGTFSEFESCIRNETSRKPVLTGDVHPLLRYVMNYLKLLVDYGDAMDSLLQISEEALYRFENDLGGDGSQLEALSPLGRQILLLMSELEYNLDEKSKLYEDSALQQVFLMNNLHYLVRKVKDSDLRGLLGDDWVRKRRGQVRQYATAYLRASWSKALSCLKDEGIGSSSNNASRVALKERFKNFNACFEEIYRAQTAWKVPDDQLREEMRINISEKVIPAYRSFMGRFSGQLEGRHAGKYIKYIPEDLETYLLDLFEGSPAVLHHIKRKS* 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2749 672 Pfam Exo70 exocyst complex subunit 297 655 IPR046364 GO:0000145|GO:0005546|GO:0006887
Tpr5g2749 672 SUPERFAMILY Cullin repeat-like 102 659 IPR016159 -
Tpr5g2749 672 Gene3D Exocyst complex component Exo70 97 665 - -
Tpr5g2749 672 Coils Coil 145 165 - -
Tpr5g2749 672 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 66 671 - -
Tpr5g2749 672 PANTHER EXOCYST COMPLEX PROTEIN EXO70 66 671 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2749 Tpr-Chr5 49625395 49628075 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2749 18 672 EXO70 exocyst subunit family AT5G50380 56.725 0.0 726
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2749 K07195 - gmx:100809716 1065.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2749 5 49625395 49628075 Tpr5g2749 5 49625395 49628075 ECH