Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2736 ATGGGAAAAGCAACACGCTGGTTTCGCGGTTTACTCGGTCTCAAAAAATCAGAACACAACTCTTCTTCTGATCACAAACCACCTAAGGAAAAACGACGATGGAGTTTCGTCAAATCATACAGAGAAGATCAACACAACAGCCACGTCACCGTTGAAACAGAAAATGTCCAAAACAACAACAACAAACAAGCCATCGCTGTCGCTGCTGCCACCGCTGCAGCGGCGGAAGCCGCCGTAGCCGCTGCTCAAGCTGCTGCCGCTGTCGTCAGATTCAATTACAGCAGTAACGGAATCGTCAGGATACGTGAACAATGGGCGGCCGTTAAGATCCAATCCGCTTTTCGAGGAAGTTTGGCGAGGAAGGCGCTCAGAGCATTAAGAGGGCTGGTGAAGCTCCAGGCATTGGTGAGAGGTCACATTGAGCGGAAACGAACAGCAGAGTGGCTCAAAAAAATGCAATCACTTTTACGGGCACAGGCACGATATAATGCAGCGCGGACTCTGCAAACCTCACATTCTAATGTAAAATCTTCTATATTCCACCTCCACGGTCCACCAACACCAGAAAAATCTGAAGAAAGTCCTGTTAGATCTAGGAGCATGAAATCTGAGCATTCACCGGCACTCAAGAGAAACGGTTCCAAATCATGTCTCCCAATCAGCGGCAATTTATCAGAGAATCAGTTAGATGAACAATCATGGAATAGAGTAAGATCACTGATAAGAAATTATAGCAGGAGCGATGAAAAACATGATAGGATTGTTGAAATTGATCCAGGAAAACAACACATGACTGTGAAACGTAGAAACCTCTTTCACTCCATCAGCGATACTGATCATTATTATTATAGTCAAAATTTGACCCCTACAAAATCTCATCAATCTGGTGAAAGTCAATCTTGTGAGGTTCAATCTTATTACAATCCACTCAAACTCAACGAAGTTGAAGAGAGCTCATTTTGCACCGCAAACGATAGTCCTCAATTTTTATCCGCGACTTCAAAAGACGATGGCTACAAAAGAAGCCCTTTTACTCCTACTAGAAGTGATGGCTCAAGAAACTACCTTAAGGGCTATTCTGATTACCCAAGTTACATGGCTTATACAGAATCATCAAAAGCAAAAGTTAGATCCTTGAGTGCACCAAAACAAAGGCCTCAATTTGAGAAATCTGGTTCATCTAATAGGTACTCACTGAATGGACATGACATGGCTAGATTGGCTACAATGAGAACATCTGCATTGCAAACAAGCTTCACTAGTAAAGGCTATCCTGGTTCTGGTCGTTTGGATAAGCTTGGAATGCCTGTGGGGTATAGATGA 1323 0.4346 MGKATRWFRGLLGLKKSEHNSSSDHKPPKEKRRWSFVKSYREDQHNSHVTVETENVQNNNNKQAIAVAAATAAAAEAAVAAAQAAAAVVRFNYSSNGIVRIREQWAAVKIQSAFRGSLARKALRALRGLVKLQALVRGHIERKRTAEWLKKMQSLLRAQARYNAARTLQTSHSNVKSSIFHLHGPPTPEKSEESPVRSRSMKSEHSPALKRNGSKSCLPISGNLSENQLDEQSWNRVRSLIRNYSRSDEKHDRIVEIDPGKQHMTVKRRNLFHSISDTDHYYYSQNLTPTKSHQSGESQSCEVQSYYNPLKLNEVEESSFCTANDSPQFLSATSKDDGYKRSPFTPTRSDGSRNYLKGYSDYPSYMAYTESSKAKVRSLSAPKQRPQFEKSGSSNRYSLNGHDMARLATMRTSALQTSFTSKGYPGSGRLDKLGMPVGYR* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2736 440 MobiDBLite consensus disorder prediction 186 209 - -
Tpr5g2736 440 MobiDBLite consensus disorder prediction 332 352 - -
Tpr5g2736 440 SMART iq_5 102 124 IPR000048 GO:0005515
Tpr5g2736 440 SMART iq_5 125 146 IPR000048 GO:0005515
Tpr5g2736 440 MobiDBLite consensus disorder prediction 178 221 - -
Tpr5g2736 440 PANTHER IQ-DOMAIN 5-RELATED 1 436 - -
Tpr5g2736 440 Pfam IQ calmodulin-binding motif 130 144 IPR000048 GO:0005515
Tpr5g2736 440 Pfam IQ calmodulin-binding motif 105 124 IPR000048 GO:0005515
Tpr5g2736 440 MobiDBLite consensus disorder prediction 376 399 - -
Tpr5g2736 440 Gene3D - 102 159 - -
Tpr5g2736 440 Pfam Protein of unknown function (DUF4005) 326 407 IPR025064 -
Tpr5g2736 440 ProSiteProfiles IQ motif profile. 103 131 IPR000048 GO:0005515
Tpr5g2736 440 ProSiteProfiles IQ motif profile. 127 154 IPR000048 GO:0005515
Tpr5g2736 440 PANTHER CALMODULIN BINDING PROTEIN IQD22 1 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2736 Tpr-Chr5 49510613 49514247 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2736 104 440 IQD Protein Family AT4G23060 43.909 2.80e-66 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2736 - - gmx:100793587 492.271