Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2733 ATGTTGGCTGGTTGTTCTAGCTCGACATTGTTGTCACCAACACACAGATTAAGGAGTGAAGCATCAGCACAGTTTCAAGCTTGTCATTTTCAGCTACCATCAATGAGCACACAGAGATTGGATTTACCTTGTAGCTTTCCGAGGAAAGACGGTTCTTCGCGTTCGCAGCAGACATTGAGGCCGGTCGGGGTATCAGTTGAGAAGTCTGAAGTCAAGAACAGCAATAACAGCAGCAGTAATTGTTCTCTGCAACAGAACATTCGGTTACCGCCTTTAGCGACGACTGCACATACATTGGCAGAGGTTAAGGATGAGGAGTTTTGGGAGAAAGGTGGGAGGAGTTTGAAGAGGCTTGCAGAACATGGATCTTTGGATGAGTCTTTTACTAATAGGGTTAAGAGGAAAAAGGGTAATAGTGGTGATGAGAATTTTGATGAATTTGAAAGGGAAAGTTTCAGTTTGGCACAATTTGGTGCTGGAAACTTTTGGTCTGTTCATGGTTTTGGAGGGTTTAATAGCCCTTCACTTCCTTTCTCTTTGAATTGTTCCGGAGATGAGGAAAGGGTTTGTTTTGCTCCTGCTGAAGTGGTTTCTGCACCTTTGCCTTTGTCCAACAATCCTTGGCTTGAATCTGCTGTAACAAAGATCACCAATTTTGGTGAAGGTAGCCACCAGCATCAACATCATCATGTCAACGAAGGTTCGGTTTCAAATGGTTCATCAGAAAGCCAGAGTTTGAGTCTGAGGTTGAATGAGAATGCATCAGAACATGAAGATGGTAATGGTTCAGGGAATCCTTATCAGCATGAAGGAACTGAAGTGGAGACAGGAGAAGAGGATGAAGAAGAGGAGCATCGCGGGTTTGAGCTTTTGAGCTTGCTTACTGGTTGTGTTGATGCTATTGGATCAAGGAATGTTGCTGCAATCAACCATTTCATTGCAAAATTGGGTGATCTTGCTTCTCCAAGAGGAACCTGCATAAGCCGAATTTGTGCTTATTATACCGAAGCCTTAGCCATCAGAGTCACCAGGCTTTGGCCTCATGTTTTTCAAATCACAGCTACTACTCGTGATTTCGATAGGGTGGTTGATGATGATGAAATGATCACTGCATTGAGGCTTCTTAACCAGGTTACCCCAATTCCAAAGTTTCTTCATTTCACATCAAATGAGATGCTGTTGAGGGCTTTTGAAGGGAAAGAAAGGGTTCACATTATAGACTTTGACATAAAGCAAGGACTTCAATGGCCTAGCTTGTTCCAAAGTTTAGCTTCAAGGACTAATCCTCCAAGCCATGTTCGAATCACCGGCGTGGGGGAATCGAAGCAAGAGTTGAATGAAACCGGAGACAGACTAGCAGGGTTTGCTGAGGCTTTGAACCTTCCCTTTGAGTTCCATCCTGTGGTGGACAGACTTGAAGATGTGAGGCTTTGGATGCTTCATGTGAAGGAACATGAAACTGTGGCTGTGAACTGTGTTATGCAGCTTCATAAGATCCTTTATGATGGTAGTGGAGGAGCATTGAGGGACTTTTTGGGTCTCATTCGCAGCACAAATCCTACAATGGTGGTTATGGCAGAGCAAGAAGCGGAACACAACGAGGCGAGGTTGGATTCAAGAGTGTGCAATTCGTTGAAATATTACTCGGCGCTGTTTGATTCGATTGATCACAGTGGCCTTCCACTGGAAAGTCCAATGAGGATCAAGATAGAGGAGATGTTTGCTAGGGAGATAAGGAACATAATTGCTTGTGAAGGAAGGGACAGGTTGGAGAGGCACCGAAGTTTCGGGAATTGGAGGAAGATGATGGTGGAGCACGGAGGGTTTCGATGCATGGGAGTCACAGACAGGGAAATGATTCAAAGCCAGTTTCTGTTAAGAATGTATTCTTGTGATAATTACAGTGTTCAGAAGCAGGAGCAGGAAGGAGCTACGGCACTTACTTTGGGTTGGCTCGATCAACCTCTCTACACAGTATCGTCTTGGGCACCGGTTGACGCGGCTGGAAGCTCATCCTCTTTTTCTCAGGCAGCTTGA 2037 0.4487 MLAGCSSSTLLSPTHRLRSEASAQFQACHFQLPSMSTQRLDLPCSFPRKDGSSRSQQTLRPVGVSVEKSEVKNSNNSSSNCSLQQNIRLPPLATTAHTLAEVKDEEFWEKGGRSLKRLAEHGSLDESFTNRVKRKKGNSGDENFDEFERESFSLAQFGAGNFWSVHGFGGFNSPSLPFSLNCSGDEERVCFAPAEVVSAPLPLSNNPWLESAVTKITNFGEGSHQHQHHHVNEGSVSNGSSESQSLSLRLNENASEHEDGNGSGNPYQHEGTEVETGEEDEEEEHRGFELLSLLTGCVDAIGSRNVAAINHFIAKLGDLASPRGTCISRICAYYTEALAIRVTRLWPHVFQITATTRDFDRVVDDDEMITALRLLNQVTPIPKFLHFTSNEMLLRAFEGKERVHIIDFDIKQGLQWPSLFQSLASRTNPPSHVRITGVGESKQELNETGDRLAGFAEALNLPFEFHPVVDRLEDVRLWMLHVKEHETVAVNCVMQLHKILYDGSGGALRDFLGLIRSTNPTMVVMAEQEAEHNEARLDSRVCNSLKYYSALFDSIDHSGLPLESPMRIKIEEMFAREIRNIIACEGRDRLERHRSFGNWRKMMVEHGGFRCMGVTDREMIQSQFLLRMYSCDNYSVQKQEQEGATALTLGWLDQPLYTVSSWAPVDAAGSSSSFSQAA* 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2733 678 MobiDBLite consensus disorder prediction 221 285 - -
Tpr5g2733 678 Pfam GRAS domain family 291 662 IPR005202 -
Tpr5g2733 678 MobiDBLite consensus disorder prediction 49 83 - -
Tpr5g2733 678 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 6 667 IPR005202 -
Tpr5g2733 678 PANTHER SCARECROW-LIKE PROTEIN 28 6 667 IPR030027 -
Tpr5g2733 678 ProSiteProfiles GRAS family profile. 281 663 IPR005202 -
Tpr5g2733 678 MobiDBLite consensus disorder prediction 232 270 - -
Tpr5g2733 678 MobiDBLite consensus disorder prediction 42 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2733 Tpr-Chr5 49480727 49484081 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2733 1 662 GRAS Transcription Factor Family AT1G63100 55.365 0.0 681
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Tpr5g2733 GRAS 4.2e-124 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2733 - - tcc:18606459 906.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2733 5 49480727 49484081 Tpr5g2733 5 49480727 49484081 ECH