Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2727 ATGGCTTCAAATTTTTGTAAACCTTCTCGTCGTGATAATTCTCTAATAATAAAAACAAGCAAATATCCTTCAAAGCCGCCTACCCTTATGCTGAAGGACTATCTCAGGGACGACGACCTGAGCTCATGTTCATCGAGCGGTTTCAAATCGTTTCCACGACGTCGACAATATTGTTGCACCACCGTTGGATTCTTACCTGAAAAAGATCTCCAACTCAAACACAAGAAGAGGAAAACAAAAACAAATACAAACACGACGAAACTTCCACGACGACGACCTACTCTTGAAAGAGCTTCCGAAGCAGTTATAACTGCCATAAAATCACTGTCCTCCTCACAAAAGAAAGCTAATTCTACCACCGGTGTTCTTTCTAGAAGCTTTTCGAGGAAGTTGTTAAGCAGAAAGTTTTGGAGAAAAGCGGTGAAGGAACAGGGAAGTGAAGGTGTACTGAAATTTAGGAGACCATTCCGGGAACTACTTATGCAGGAACGAGACTATAAACCGACGTCGTTTAGTGCTGCTAAAAGCATCACCAGCGTTTCTTCTGGTTGTTGCAGTAACAGCTGGGGAGAAACTGAATTTACGTTTACATCAAACGCTACTTCTTCCGATAGCTCCTCCGAAAATGAACTAGTTGACGGCGGAAAAGACGGCGCTCCCCCTCAGCACAAGATAGAAGGAGATTGGTCAAATGAGAAGGAGCAATTCAGTCCTGTATCAATACTAGACTGCCCATTTGAAGATGAAGAAGAGATCAAGTCCCATTCCATCATCAATTCTTTCTTCCAAGGAGCAGAAAACAAGCATATGCAGAAGACGCGACATTTTGAGAATGTAGCAGCTTCACTGGAGCCATTGGTTTTAGAGAAAAGGATCCAATGCTTAGAACTAGAAGATGAACTAAACAACAAATCTACAAAACAATGTTCAGCATTACACTCAATTATTCGAAACAACGAAGACGAGGATGAGCTAAACATTCTCAAGCTTGTCAAGAGTTCAATTCCATCCAACAGTTTGATGATTAACACAGAGAAACTACTGTTTGATTACTTAGAACAAAGCATTGAGGAAAATAACAAAGATAATAATTATTCAAAGAAGTTTAATCTTTGCAATGTAGTAGAGGATTGGATACAAGGACACCCTCAAGAACCATATTTGGGTTGGGAAGTGAAAGAAGGAAGACATGTCTACATTAACGAGATGGAAAAAAGTGGAGACTGGAAAAACTCTGATCAAGAAACAGAACAACTTGTTCTAGAGCTAGAAAATGAAGTATTAACTAGTTTCGTTGACGAGATTGTTCTTGATCTCGTCATATGTTAG 1329 0.3995 MASNFCKPSRRDNSLIIKTSKYPSKPPTLMLKDYLRDDDLSSCSSSGFKSFPRRRQYCCTTVGFLPEKDLQLKHKKRKTKTNTNTTKLPRRRPTLERASEAVITAIKSLSSSQKKANSTTGVLSRSFSRKLLSRKFWRKAVKEQGSEGVLKFRRPFRELLMQERDYKPTSFSAAKSITSVSSGCCSNSWGETEFTFTSNATSSDSSSENELVDGGKDGAPPQHKIEGDWSNEKEQFSPVSILDCPFEDEEEIKSHSIINSFFQGAENKHMQKTRHFENVAASLEPLVLEKRIQCLELEDELNNKSTKQCSALHSIIRNNEDEDELNILKLVKSSIPSNSLMINTEKLLFDYLEQSIEENNKDNNYSKKFNLCNVVEDWIQGHPQEPYLGWEVKEGRHVYINEMEKSGDWKNSDQETEQLVLELENEVLTSFVDEIVLDLVIC* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2727 442 MobiDBLite consensus disorder prediction 197 216 - -
Tpr5g2727 442 PANTHER OS04G0572500 PROTEIN 14 439 - -
Tpr5g2727 442 PANTHER OS04G0572500 PROTEIN 14 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2727 Tpr-Chr5 49451225 49455007 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2727 41 441 TRM (TON1 Recruiting Motif) Superfamily AT4G11780 32.272 1.69e-33 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2727 - - cam:101506843 436.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2727 5 49451225 49455007 Tpr5g2727 5 49451225 49455007 ECH