Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2709 ATGTCTTCACTCACAAATTTTTTGTTCCAAAACACCTACATAAAAGATTGGTTCAGTGGTGACATCACAACAACACTCATCGTACCATTCTTAATAATTACCACAGTAACTTGGTATTTTTACCTCTTCTTCATCAAATCCAAAGCCCAGAAACTTCCACCAGGCCCACCGGGCCTTCCTTTCTTCGGTAACCTCCTATCTCTCGACCCAGAACTTCACACTTACTTCGCAAGCCTGGCCCAAGCCCACGGTCCAATTTTCAAACTCTGGCTCGGTAGCAAACTCGGAATCGTGTTAACTTCACCTACGACGGCGCGTGAGGTGTTAAAAGACCACGACACCGTTTTCGCCAACCGTGATGTCCCCGCCGCCGGTAGAGCCGCCACATACGGCGGCACGGATATAGTATGGAGCCCGTATGGACCAGAATGGAGGATGCTGAGAAAAGTCTGTGTCCTCAAGATGCTTAGCAACACGACTCTTGACTCCGTTTACGAGCTCCGGCGCGGTGAAGTTCGAAAAGCGGTCGGGTCTATTTATAATCGGGTCGGGTCGACGGTGAATATTGGGGAGGAAGTTTTTCTGACGGTTTTGAATGTGATTACTACCATGATGTGGGGTGCGGCGGTGGAAGGGGAAGAGAGGGTAAGTATAGGGGTGGAGTTCAGGGAGACGGTGGCGGGAATTGTACATCTTTTGGGGAAACCGAATTTGTCGGACTTTTTTCCCGGGTTGGCCCGATTTGATTTACAAGGTGTGGTGAAAGAGATGAATAAGTTAGCTCCACGTTTTGATAGGATATTTGAAAAAATGATTGGTGAACGTGTGAAGAAAGAAGGGGAGGGGAAAGAAAATGAAAGTAAGGATTTTTTGCAGTTTTTGTTGAATTTGAAGGATGAGGGTGATTCTAAGACACCATTCACAAGCACCCATGTTAAGGCTCTACTCATGGACATGGTTGTGGGTGGATCAGACACATCCTCCAACACAATTGAGTTTGCATTGGCAGAAATGATGAACAACCCAGAAGTAATGAAGAAAGTTCAAGAGGAGTTAGAAGCTGTGGTTGGAAAAGATAACTTGGTAGAAGAGTCTCACACTCATAAGTTACCTTACTTACATGCAGTGATGAAAGAAACACTTCGTTTGCACCCAGCACTTCCACTTTTAGTCCCTCATTGTCCAAGTGAAACCACCAATGTTGGAGGCTACACAATTCCAAAGGGATCTCGTGTGTTTGTGAACGTTTGGGCTATTCATAGAGACCCTTCCATTTGGGAGAACCCACTAGAATTTGATCCTACAAGGTTCTTGGATGGTAAATGGGATTACAGTGGAAATGACTTCAATTATTTTCCATTTGGTTCTGGGAGAAGGATTTGTGCCGGAATAGCAATGGCTGAGAGGACTGTTTTGTACTTTATAGCTACCCTTGTGCACTTGTTTGAATGGACTATACCACAAGGAGAAAAGTTGGAGGTATCAGAGAAATTTGGTATTGTTCTTAAAAAGAAGACACCTTTGCTTGCCATACCCACGCCGCGACTTTCCAATTCAGAGCTTTATAAATAG 1572 0.4491 MSSLTNFLFQNTYIKDWFSGDITTTLIVPFLIITTVTWYFYLFFIKSKAQKLPPGPPGLPFFGNLLSLDPELHTYFASLAQAHGPIFKLWLGSKLGIVLTSPTTAREVLKDHDTVFANRDVPAAGRAATYGGTDIVWSPYGPEWRMLRKVCVLKMLSNTTLDSVYELRRGEVRKAVGSIYNRVGSTVNIGEEVFLTVLNVITTMMWGAAVEGEERVSIGVEFRETVAGIVHLLGKPNLSDFFPGLARFDLQGVVKEMNKLAPRFDRIFEKMIGERVKKEGEGKENESKDFLQFLLNLKDEGDSKTPFTSTHVKALLMDMVVGGSDTSSNTIEFALAEMMNNPEVMKKVQEELEAVVGKDNLVEESHTHKLPYLHAVMKETLRLHPALPLLVPHCPSETTNVGGYTIPKGSRVFVNVWAIHRDPSIWENPLEFDPTRFLDGKWDYSGNDFNYFPFGSGRRICAGIAMAERTVLYFIATLVHLFEWTIPQGEKLEVSEKFGIVLKKKTPLLAIPTPRLSNSELYK* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2709 523 Pfam Cytochrome P450 53 507 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g2709 523 Gene3D Cytochrome P450 45 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g2709 523 PANTHER OS08G0547900 PROTEIN 21 523 - -
Tpr5g2709 523 SUPERFAMILY Cytochrome P450 53 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g2709 523 PRINTS P450 superfamily signature 322 339 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g2709 523 PRINTS P450 superfamily signature 375 386 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g2709 523 PRINTS P450 superfamily signature 452 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g2709 523 PRINTS P450 superfamily signature 461 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g2709 523 PRINTS E-class P450 group I signature 80 99 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g2709 523 PRINTS E-class P450 group I signature 104 125 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g2709 523 PRINTS E-class P450 group I signature 196 214 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g2709 523 PRINTS E-class P450 group I signature 311 328 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g2709 523 PRINTS E-class P450 group I signature 331 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g2709 523 PRINTS E-class P450 group I signature 374 392 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g2709 523 PRINTS E-class P450 group I signature 415 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g2709 523 PRINTS E-class P450 group I signature 451 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g2709 523 PRINTS E-class P450 group I signature 461 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr5g2709 523 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 454 463 IPR017972 GO:0005506|GO:0016705
Tpr5g2709 523 PANTHER CYTOCHROME P450, FAMILY 706, SUBFAMILY A, POLYPEPTIDE 3-RELATED 21 523 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2709 Tpr-Chr5 49273132 49276484 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2709 1 522 Cytochrome P450 AT4G12300 58.745 0.0 631
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2709 - - gmx:100787507 787.719