Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2695 ATGGAGGCTAGTGGCGGTGTTAGTGGTGGCGTTACGGTGGTTGGATCGGATGCTCCGTCGGAGTACCATGTAGCTCCGAGAAACGACATCCAAACTCCGACGACCGGATCGGTAGTTCAGATTACTGCGGTGGTTCAAGGAGGTGTTCCGCCGCAACCTCCGCCGCACACGGCGGTGTCAACGGCGTCGCCGGCAGTTACACCGGTGCCAGAGAAAAAGAAGAGAGGACGGCCGAGAAAGTATCCACAAGACGGTTCGGTGACGACGGCGCTGTCTCCAAAGCCGATATCTTCGTCTGCTCCATTGCCGCCGGTGATCGATTTCACGGCGGAGAAACGTGCAAAAGTGCGGCCAGTTAGTTCAGTGAGCAAAGCTAAATTTGAGTTGGAAAATATAGGTGAATGGACCCCTTACTCAGTTGGTTCTAATTTCACACCCCACATCATCACTGTTAATGCCGGAGAGGATGTTACTATGAAGGTAATATCATTTTCTCAGCAAGGGCCTCGAGCTCTATGCATTCTTTCAGCAAATGGTGTAATAAAAAGTGTCACACTTCGTCAGCCCGATTCTTCTGGGGGCACATTGACATATGAGGGATTATTTGAAATTCTGTCTTTATCTGGTTCTTTCACGCCAAATGAAAGTGGTGGAACGCGAAGCAGATCAGGTGGCATGAGTGTTTCTTTAGCAAGTCCTGATGGACGTGTTGTTGGTGGAGGAGTAGCTGGTCTGTTGGTGGCTGCAAGTCCAGTGCAGGTAGTGGTCGGTAGTTTTATGGCAGGAAACCAACATGAGCAGAAGCAAAGAAATCAGAAACATGATATGATATCAACTGTGACTTCTGCTGCTGTTGTTCCAATCCCGACTCTTGATCCAATACCTATTCTATCATCAGTATCTTCCTTTCGCGGAGATAATTGGTCTGCTGTGCAAGCACCGGATGCAAAGGATAAGCCTGCTGCTGACATTAATGTGTCACTTCCTGTAGGCTAG 996 0.492 MEASGGVSGGVTVVGSDAPSEYHVAPRNDIQTPTTGSVVQITAVVQGGVPPQPPPHTAVSTASPAVTPVPEKKKRGRPRKYPQDGSVTTALSPKPISSSAPLPPVIDFTAEKRAKVRPVSSVSKAKFELENIGEWTPYSVGSNFTPHIITVNAGEDVTMKVISFSQQGPRALCILSANGVIKSVTLRQPDSSGGTLTYEGLFEILSLSGSFTPNESGGTRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFMAGNQHEQKQRNQKHDMISTVTSAAVVPIPTLDPIPILSSVSSFRGDNWSAVQAPDAKDKPAADINVSLPVG* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2695 331 ProSiteProfiles PPC domain profile profile. 141 280 IPR005175 -
Tpr5g2695 331 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 9 329 IPR039605 GO:0003680
Tpr5g2695 331 SUPERFAMILY AF0104/ALDC/Ptd012-like 142 264 - -
Tpr5g2695 331 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 1 9 329 - -
Tpr5g2695 331 MobiDBLite consensus disorder prediction 1 33 - -
Tpr5g2695 331 CDD DUF296 145 236 IPR005175 -
Tpr5g2695 331 Pfam Plants and Prokaryotes Conserved (PCC) domain 146 259 IPR005175 -
Tpr5g2695 331 MobiDBLite consensus disorder prediction 52 98 - -
Tpr5g2695 331 Gene3D - 146 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2695 Tpr-Chr5 49161215 49165867 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2695 1 328 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 57.746 6.53e-116 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2695 - - gmx:100801730 475.707