Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2693 ATGACTGCTTCACAATGTATATGTTTCATTTTATTACAGTTTAGCACAGACCTTCCAGACAGGAGTTCATATTTGCGGAAGAGGTCAAGGTCAAGTTCATCATCATGGGAAAGTTACGTTGCAAGGCCTCTAGATGAAATCAAAGAAGCTACAAAACAAGAAAGAATTCGTGCTTACGAGGCTGCAGAGGCACTCCAAATCAATTTGCAGTCTTCGAAGCCATCATTTATCAAGTCAATGCTCCGGTCTCATGTTTATAGTTGTTTTTGGTTGGGTCTTCCTAGTAGATTTTGTGAGGAACACCTTCCAAAAACGGTGTATAACATGACTTTAGAGGATGAAGATGGCTCAGAGTATGATGCTGTTTATATTGGTAGTAGAACTGGGCTCAGTGGTGGCTGGAGAGCATTTGCATTGGAACATAAATTGGATGATGGCGATGCACTTGTTTTTGAATTGGTTGAACCAGCAAGATTTAAGATTTATATTGTTAGAGCATTTCCAAATATAGATGAAGAGGAAGTAGAAGAAAACGATACTCTGGTGAAAGAAGAAAATATGAACACATCCAAAGCAACAAAAGTATCCAAGGCTGCCTCTAATTGTGGATCAAAATCAAAGAAAACTAAAAAGCAAAAACATGTCATTGAAATGAAGGAATCAGATAGTTCTGAAGAAAGCATGCCAGAAATTAACATTGACAAAGAATCCAAACCACAGTGGCTAAATCTGAGTAGGAAAACTAGATCTTTTCGGAAAGAAGTGCAAAAGAAGCCTAAATCGCCTACTACTCCTGATTCTGAGTCAAATGAGGAAGCAAAAATGTAA 828 0.3792 MTASQCICFILLQFSTDLPDRSSYLRKRSRSSSSSWESYVARPLDEIKEATKQERIRAYEAAEALQINLQSSKPSFIKSMLRSHVYSCFWLGLPSRFCEEHLPKTVYNMTLEDEDGSEYDAVYIGSRTGLSGGWRAFALEHKLDDGDALVFELVEPARFKIYIVRAFPNIDEEEVEENDTLVKEENMNTSKATKVSKAASNCGSKSKKTKKQKHVIEMKESDSSEESMPEINIDKESKPQWLNLSRKTRSFRKEVQKKPKSPTTPDSESNEEAKM* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2693 275 MobiDBLite consensus disorder prediction 188 275 - -
Tpr5g2693 275 CDD B3_DNA 74 165 IPR003340 GO:0003677
Tpr5g2693 275 ProSiteProfiles B3 DNA-binding domain profile. 76 167 IPR003340 GO:0003677
Tpr5g2693 275 SUPERFAMILY DNA-binding pseudobarrel domain 70 165 IPR015300 -
Tpr5g2693 275 MobiDBLite consensus disorder prediction 247 275 - -
Tpr5g2693 275 MobiDBLite consensus disorder prediction 188 203 - -
Tpr5g2693 275 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 29 181 IPR044837 -
Tpr5g2693 275 SMART B3_2 76 167 IPR003340 GO:0003677
Tpr5g2693 275 Pfam B3 DNA binding domain 76 165 IPR003340 GO:0003677
Tpr5g2693 275 Gene3D - 50 167 IPR015300 -
Tpr5g2693 275 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS05G0481400 29 181 - -
Tpr5g2693 275 MobiDBLite consensus disorder prediction 213 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2693 Tpr-Chr5 49156500 49158616 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2693 21 171 B3 DNA Binding Superfamily AT5G58280 58.940 1.23e-55 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Tpr5g2693 B3 7.3e-16 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2693 - - cam:101498339 368.622