Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2673 ATGGATTTGAAGCCTTCTCATGTTTCGCCAATTCTTACTGATCCTGTTCCTGCCAACAAGTCAAGGCTTGGAATCCATTCTAGTTTGTTAGCTTATTCGCAACAAGAGTCACCATTATCAAGTCCAGGGAAGTATACAAAATCAAATTCAAAGAAAAATATGGGAAATCTTGATGATGTTAGGTCTAATGGCTGGTTGGATGCTATGAAGGCATCTTCGCCTCCAAGAAAGAAGTCGGCACATAAAGGTTCGAGTGCTCAGGTTGCTTCATTTGACTATGACGTTGAAGATTATAATTTATGGATGCTGGGATATCCGTCAGCACTAGACGCTTTTGAGAAAATCGTTGATCGCGCAAAGGATAAGAAGATTGCAATGTTTCTAGATTATGATGGCACTCTTTCACCTATAGTAGAAGATCCTGATTGTGCTTTTATGTCTGAACCTATGCGAACAACGGTGCAAAATGTGGCGAAGTATTTCCCTACAGCAATAATTAGTGGAAGAAGTCGTGACAAGGTTTTTGATTTAGTTAAACTAACAGAACTCTACTATGCCGGTAGTCATGGGATGGACATTATCGGCCCTGTTAGTGACACTTTGTCCGTAAACCATCCAAATTGTATCAAGTCTACTGACCAACAGGGAAAGGAGATTACTCTCTTTCAACCGGCAAGAGAATTCCTTCCTATGATTGATGAGGTTTTTAAAACCCTCATTGAGATTACTAAAGATATAGAAGGCGCAAAAGTTGAAAATCACAAGTTTTGCGTTTCTGTACATTACCGTAATGTAGAAGAGAATAATTGGACAACGATAGGACAACGTGTCCATGATATCATAAAGAATTATCCTCGTTTACGCTCAACTCATGGACGGAAGGTTTTAGAAATCCGTCCTGTAATTGACTGGAACAAAGGAAAAGCTGTTGAATTTTTGCTTGAATCTCTAGGGTTGACTGATAGGAATGATGTGCTTCCCATTTACATTGGAGATGATAAAACTGATGAAGATGCATTCAAGGTGCTGAGGGAGAGGAATCGAGGTTATGGGATATTGGTTTCATCAGCGAGAAAAGAAAGCAATGCATTCTACTCTCTCCGAGACCCTAACGAGGTCATGAAATTTCTTCAACTCTTGGTGAATTGGAAGAGGGACCAAGAAAAAGCATGTGAAATGAATCTCATATAA 1191 0.3955 MDLKPSHVSPILTDPVPANKSRLGIHSSLLAYSQQESPLSSPGKYTKSNSKKNMGNLDDVRSNGWLDAMKASSPPRKKSAHKGSSAQVASFDYDVEDYNLWMLGYPSALDAFEKIVDRAKDKKIAMFLDYDGTLSPIVEDPDCAFMSEPMRTTVQNVAKYFPTAIISGRSRDKVFDLVKLTELYYAGSHGMDIIGPVSDTLSVNHPNCIKSTDQQGKEITLFQPAREFLPMIDEVFKTLIEITKDIEGAKVENHKFCVSVHYRNVEENNWTTIGQRVHDIIKNYPRLRSTHGRKVLEIRPVIDWNKGKAVEFLLESLGLTDRNDVLPIYIGDDKTDEDAFKVLRERNRGYGILVSSARKESNAFYSLRDPNEVMKFLQLLVNWKRDQEKACEMNLI* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2673 396 MobiDBLite consensus disorder prediction 34 60 - -
Tpr5g2673 396 PANTHER TREHALOSE-PHOSPHATE PHOSPHATASE F-RELATED 1 390 - -
Tpr5g2673 396 CDD HAD_TPP 125 375 - -
Tpr5g2673 396 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 126 345 IPR006379 -
Tpr5g2673 396 TIGRFAM T6PP: trehalose-phosphatase 122 381 IPR003337 GO:0003824|GO:0005992
Tpr5g2673 396 MobiDBLite consensus disorder prediction 1 20 - -
Tpr5g2673 396 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 390 IPR044651 GO:0004805|GO:0005992
Tpr5g2673 396 SUPERFAMILY HAD-like 125 384 IPR036412 -
Tpr5g2673 396 Pfam Trehalose-phosphatase 127 370 IPR003337 GO:0003824|GO:0005992
Tpr5g2673 396 Gene3D - 124 212 IPR023214 -
Tpr5g2673 396 Gene3D - 225 394 IPR023214 -
Tpr5g2673 396 MobiDBLite consensus disorder prediction 34 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2673 Tpr-Chr5 48929993 48936022 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2673 120 380 Trehalose Biosynthesis Gene Families AT1G70290 25.442 3.25e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2673 K01087 - tcc:18606311 561.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2673 5 48929993 48936022 Tpr5g2673 5 48929993 48936022 ECH