Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2672 ATGTTGGGTTTCAGAGCCCAGGATCCCCGTCTCCATGCCATCAAAAATAAGATTCGTGTAGTCCCCAATTTTCCTAAACCTGGCATCATGTTCCAAGACATTACTACTCTGCTGCTGGATCCCAAAGCCTTTAAGGACACGATAGGTTTGTTCGTTGAGCGATACAGAGGCAAAAACATTTCTATTGTTGCAGGAATTGAAGCCAGGGGTTTTATTTTTGGTTCTCCAATTGCATTGGCAATAGGAGCAAAATTTGTACCATTGAGGAAACCAAAAAAATTACCTGGGAAAGTTATTTCTCAAGAGTATATATTGGAATATGGAAGAGACTGTCTTGAGATGCATGTTGGAGGAGTTGAACATGGTGAACGTGCATTAGTAGTTGATGATTTGATTGCTACTGGTGGAACACTTTGTGCAGCTATGGATTTGCTAGAACGTGAGGGAGCAGAGATAGTTGAGTGTGCATGCGTAATTGAATTACCAGAATTAAAGGGTCGTGAACGGTTGAATGGGAAATCCTTGTATGTGTTAATCGAATGTTTTGAGTCTTGTGACTCTCAATAG 567 0.4092 MLGFRAQDPRLHAIKNKIRVVPNFPKPGIMFQDITTLLLDPKAFKDTIGLFVERYRGKNISIVAGIEARGFIFGSPIALAIGAKFVPLRKPKKLPGKVISQEYILEYGRDCLEMHVGGVEHGERALVVDDLIATGGTLCAAMDLLEREGAEIVECACVIELPELKGRERLNGKSLYVLIECFESCDSQ* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2672 188 Gene3D - 3 181 IPR029057 -
Tpr5g2672 188 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 3-RELATED 6 180 - -
Tpr5g2672 188 Pfam Phosphoribosyl transferase domain 49 169 IPR000836 -
Tpr5g2672 188 SUPERFAMILY PRTase-like 14 176 IPR029057 -
Tpr5g2672 188 TIGRFAM apt: adenine phosphoribosyltransferase 14 180 IPR005764 GO:0003999|GO:0005737|GO:0006168
Tpr5g2672 188 CDD PRTases_typeI 50 180 IPR000836 -
Tpr5g2672 188 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 6 180 - -
Tpr5g2672 188 Hamap Adenine phosphoribosyltransferase [apt]. 14 181 IPR005764 GO:0003999|GO:0005737|GO:0006168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2672 Tpr-Chr5 48912522 48924663 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2672 7 181 PRT Gene Family AT1G27450 74.857 6.66e-96 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2672 K00759 - gmx:100791569 339.347