Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2671 ATGGCTAGTAAATGGATGAGGTCATTACAATGCAAATCAAAAGCATTTGAAGACGTTTATAATCCATATCCCAAAATCTTAATACCCAATGCCAGTTGCAGAAAAACTGTTCAAAACATCAAAGACATTGTCGATGTTCCAAAACTCAAACCTAAAAAACCAAAAACATCCTTAGAAAACAAACATTCTAGTTCAAAAGCAAAATCAGAATCAGAATCATCCACCGCAACAACAACCACTTCATCATCATCTTCACGTGCGATCACTGAATTACCAGAAGGACATCCATCACGCAACGTGGTGGATATAATTTTCCATACTAGTTGGGGCAATAAGGAGTTTCCGGGTCGGGTTGAAAAGGTGTTTAAGGTGCAAAACGGAGCACGAACTATGTCAAGGTTTGAAGAGTTTCGTGAGGCGGTGAAATCACGCGCCGCTGATTCTGTTGTTGATTCTGAGGGGAAGAATTGGGAGGAGAATGCAAGGTGTGTTGCTGATGGAAATGAGGTGATGCAGTTTCATTGTTTGGGTCCTGCTGATGATGGTGGTTCACACGGTGCTTGGTTGTTTCCGGAGCGTAAAGGGTCGGCGATTTGTACGTTTTCCGGGAGCGGTGGTGCGCATGAGTATGGCGGAGGAAGGAAGGGTAGAGAGGCAATGTTGGTTTGTCGGGTTGTGGCGGGTCGGGTTTCGAAACAACTTGGGTTTTTGGATTCTTTGTTGGATAAGCGAGTTGGGTTTGATTCAGTGAGTGGGGAAAATGGTGAGTTGTTGGTGTTTGACTCGCGTGCGGTATTGCCATGTTTTCTTATTATTTACAGCTTGTAA 828 0.4384 MASKWMRSLQCKSKAFEDVYNPYPKILIPNASCRKTVQNIKDIVDVPKLKPKKPKTSLENKHSSSKAKSESESSTATTTTSSSSSRAITELPEGHPSRNVVDIIFHTSWGNKEFPGRVEKVFKVQNGARTMSRFEEFREAVKSRAADSVVDSEGKNWEENARCVADGNEVMQFHCLGPADDGGSHGAWLFPERKGSAICTFSGSGGAHEYGGGRKGREAMLVCRVVAGRVSKQLGFLDSLLDKRVGFDSVSGENGELLVFDSRAVLPCFLIIYSL* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2671 275 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 2 274 - -
Tpr5g2671 275 MobiDBLite consensus disorder prediction 69 90 - -
Tpr5g2671 275 SUPERFAMILY ADP-ribosylation 88 274 - -
Tpr5g2671 275 MobiDBLite consensus disorder prediction 51 93 - -
Tpr5g2671 275 MobiDBLite consensus disorder prediction 51 68 - -
Tpr5g2671 275 Gene3D - 86 274 - -
Tpr5g2671 275 PANTHER POLY(ADP-RIBOSE) POLYMERASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 2 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr5g2671 Tpr-Chr5 48908385 48909212 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2671 87 275 C2H2 Transcription Factor Family AT2G29660 35.965 3.02e-32 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2671 - - cam:101501278 356.295
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2671 5 48908385 48909212 Tpr5g2671 5 48908385 48909212 ECH