Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr5g2646 ATGCTACGTCGATTCCTATTGTCAACAAAAACCAATCTTTTCCAAAACCCTAACCACCCTTTATCTCCTTCACTAACCACCATTCGAACCATGAGTTCAACATCTTCGCAACGCATGTTCCAGCTCAAAATCGACCCTTTAACCGGTAACTCCGAATGGGTCATCATCGATGAACACAACAACGACGAAGAACAAACCTTCAACCAACCCCTTCTCGCCACAACATCATATTTAGACATGCTCAATGATTCAACCAGAAACACAGCATTTCGTCAAGCCATTGAAAAAACAGTAACGAAACCTTGTCACGTTCTCGATATTGGTGCTGGAACTGGGTTGCTTTCGATGATGGCTTCACGAGCTATGGATGGGAAAGGGACTGTGACGGCGTGTGAGTCTTATCTTCCGATGGTGAAATTGATGAAGAAGGTTATGCGACTTAATGGGATGGATGGAAGAATCAAAGTTTTCAATAAGCGTTCTGATGAACTTGAAGTTGGTAGTGATATATCTTCGCGTGCTGATGTTCTTGTGAGCGAGATATTAGATTCAGAGTTATTGGGTGAGGGGCTTATACCAACCCTACAACATGCGCATGACAATTTGTTGGTGGAAAACCCTCTAACTGTACCATATCGAGCAACTACATATGGACAGCTAGTTGAAAGCACTTTCTTATGGCGATTGCATGATTTGCGTAGCAATGAGGCTGGTGCATCTGATGGCATTCGACTCGCCCCTCCTGGACTTGAAAGTGTTATAGGTGTAAAACGTCAGCAATATGCCATGCATTGTGATCCAATAGGAGAAGAACTGAAACCGCTTTCAGAACCCTTCAAAATTTTTGAATTTGATTTTTGGAAACGGCCAGAGAGTTACGGCGAAACTGAGCTATGCATAAAGGCAACTGATGATGGAAGAGTTCACGCTATTGTCTCTTGGTGGGTACTTCAACTTGATCGTGAAGGGACAATTTATTATTCCACTGCTCCTAGGTGGATAAGATCGCCAACAATTACAAGTCCTGTTGATTGGTGTGACCACTGGAAACAGTGTGTTTGGTTTGTTCCAGGGAGTGGTATATCAATATTCAAAGGGGGAGACATTAATTTACATGCTATTCACGATGATATTAGTATCTCATATAATTTAAATACACGTGTGTCAACAACTGAGGTTTTGCATGATGGGTTGACGATTGGAGATTTTCAGCTTTCACTTCCTCCAGAAAGAGCTGCAATCTATGGAGACGAAGGATGGAGGCTTTCAATGTTGAAAGCAGTAAAAAGTGTGTTGCAGGGAAGAGGCAACTTATTATGCTTGGTTGCAGATGATAGTGTGTATTTGCCTCTTCTTGTTGCGAAGTTTTCAGAAGCACCGCATGTAATATCATCTTTTTCGAGGCTGAAGGAAAAGGGCCTCCAATATTTGCAAGCTGCTGCCCGTGCAAATAACCTGCCACCTAATTGCATAAAAACTGTTGAAAAAGGGTTGAAACAGTTAACCATGCATGATACAAACCAGAAAAAGGTTGACCTGTTAATAGCAGAACCTTTCTATTTTGGACATGATGGCATGCTTCCATGGCAGAACCTGCGATTTTGGAAGGATCGTACAACACTTGATCATATCCTCTCTGAAGATGCTATAATAATTCCCAGTAAAGGAATTTTGAGGGCTTGTGCCATCTATCTTCCTGATCTTTGGAAAAGTCGTTCCTGCTTGAGTACGATAGAAGGTTTCGACCATTCTGGTGTAAACGCTACATTGGGAGCTTGCGGTCATCTACCTGAATCAGAAGATGGTCCTTGTCTGCCTTTTTCTCTTTGGCAGTGTGGAGAGTTCGATGTGCTTAGTGAGACATTTGATGTGATGGAGTTTGATTTCACAAAACAAATATGCCAATGTGAAGGAAAATCCCAGGTTAAATTCACGAAGACAGGAGTATGTCATGGGTTTGCGCTATGGATTGACTGGGTGATGGATTCGCAAAATTCTGCTGTGATATCAACTGGTCCAGATAAGAGATATTGGAAACAAGGAATAAAGCTTCTTGCAACACCTAGAACTGTAGGATCCCAAGGATCAACAAATGTCCGAGCATGTTGTTCTGCAGATCTTGAAGCATCTTTTAATCCATCAAATGGGGAACTCAAAATTATACATGATTTCTTATGA 2178 0.4183 MLRRFLLSTKTNLFQNPNHPLSPSLTTIRTMSSTSSQRMFQLKIDPLTGNSEWVIIDEHNNDEEQTFNQPLLATTSYLDMLNDSTRNTAFRQAIEKTVTKPCHVLDIGAGTGLLSMMASRAMDGKGTVTACESYLPMVKLMKKVMRLNGMDGRIKVFNKRSDELEVGSDISSRADVLVSEILDSELLGEGLIPTLQHAHDNLLVENPLTVPYRATTYGQLVESTFLWRLHDLRSNEAGASDGIRLAPPGLESVIGVKRQQYAMHCDPIGEELKPLSEPFKIFEFDFWKRPESYGETELCIKATDDGRVHAIVSWWVLQLDREGTIYYSTAPRWIRSPTITSPVDWCDHWKQCVWFVPGSGISIFKGGDINLHAIHDDISISYNLNTRVSTTEVLHDGLTIGDFQLSLPPERAAIYGDEGWRLSMLKAVKSVLQGRGNLLCLVADDSVYLPLLVAKFSEAPHVISSFSRLKEKGLQYLQAAARANNLPPNCIKTVEKGLKQLTMHDTNQKKVDLLIAEPFYFGHDGMLPWQNLRFWKDRTTLDHILSEDAIIIPSKGILRACAIYLPDLWKSRSCLSTIEGFDHSGVNATLGACGHLPESEDGPCLPFSLWQCGEFDVLSETFDVMEFDFTKQICQCEGKSQVKFTKTGVCHGFALWIDWVMDSQNSAVISTGPDKRYWKQGIKLLATPRTVGSQGSTNVRACCSADLEASFNPSNGELKIIHDFL* 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr5g2646 725 Gene3D - 213 396 - -
Tpr5g2646 725 Gene3D Vaccinia Virus protein VP39 405 553 IPR029063 -
Tpr5g2646 725 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 77 373 IPR029063 -
Tpr5g2646 725 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 474 701 IPR029063 -
Tpr5g2646 725 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 7 33 666 - -
Tpr5g2646 725 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 33 666 IPR025799 GO:0016274|GO:0018216
Tpr5g2646 725 Pfam Ribosomal protein L11 methyltransferase (PrmA) 92 184 - -
Tpr5g2646 725 Gene3D - 557 724 - -
Tpr5g2646 725 Gene3D Vaccinia Virus protein VP39 70 212 IPR029063 -
Tpr5g2646 725 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 57 381 IPR025799 GO:0016274|GO:0018216
Tpr5g2646 725 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 391 725 IPR025799 GO:0016274|GO:0018216
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr5g2646 77 217 C2H2 Transcription Factor Family AT3G12270 31.333 9.70e-11 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr5g2646 K11438 - gmx:100785846 1161.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr5g2646 5 48648477 48653544 Tpr5g2646 5 48648477 48653544 ECH